RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 NLRP10Q86W26 655 aa22.53■■□□□ 1.2
HSPG2-204ENST00000412328 WDR63Q8IWG1 891 aa22.53■■□□□ 1.2
HSPG2-204ENST00000412328 PLBD2Q8NHP8 589 aa22.53■■□□□ 1.2
HSPG2-204ENST00000412328 C7orf43Q8WVR3 580 aa22.53■■□□□ 1.2
HSPG2-204ENST00000412328 ZNF622Q969S3 477 aaKnown RBP eCLIP22.53■■□□□ 1.2
HSPG2-204ENST00000412328 LTBP1Q14766 1721 aa22.53■■□□□ 1.2
HSPG2-204ENST00000412328 NPHP1O15259 732 aa22.52■■□□□ 1.2
HSPG2-204ENST00000412328 TCIRG1Q13488 830 aa22.52■■□□□ 1.2
HSPG2-204ENST00000412328 PHAXQ9H814 394 aaKnown RBP22.52■■□□□ 1.2
HSPG2-204ENST00000412328 NPR1P16066 1061 aa22.51■■□□□ 1.19
HSPG2-204ENST00000412328 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
HSPG2-204ENST00000412328 CNKSR1Q969H4 720 aa22.51■■□□□ 1.19
HSPG2-204ENST00000412328 ISCA1Q9BUE6 129 aa22.51■■□□□ 1.19
HSPG2-204ENST00000412328 C9orf131Q5VYM1 1079 aa22.5■■□□□ 1.19
HSPG2-204ENST00000412328 WDR90Q96KV7 1748 aa22.5■■□□□ 1.19
HSPG2-204ENST00000412328 LTBP3Q9NS15 1303 aa22.5■■□□□ 1.19
HSPG2-204ENST00000412328 C21orf2O43822 256 aa22.49■■□□□ 1.19
HSPG2-204ENST00000412328 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
HSPG2-204ENST00000412328 PPP1R42Q7Z4L9 355 aa22.49■■□□□ 1.19
HSPG2-204ENST00000412328 SPEF2Q9C093 1822 aa22.48■■□□□ 1.19
HSPG2-204ENST00000412328 HOXA10P31260 410 aaPredicted RBP22.48■■□□□ 1.19
HSPG2-204ENST00000412328 TWISTNBQ3B726 338 aaPredicted RBP22.48■■□□□ 1.19
HSPG2-204ENST00000412328 SLC10A5Q5PT55 438 aa22.48■■□□□ 1.19
HSPG2-204ENST00000412328 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
HSPG2-204ENST00000412328 COL4A5P29400 1685 aa22.48■■□□□ 1.19
HSPG2-204ENST00000412328 DUOX1Q9NRD9 1551 aa22.47■■□□□ 1.19
HSPG2-204ENST00000412328 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
HSPG2-204ENST00000412328 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
HSPG2-204ENST00000412328 SLC51AQ86UW1 340 aa22.47■■□□□ 1.19
HSPG2-204ENST00000412328 UTP14AQ9BVJ6 771 aaKnown RBP22.47■■□□□ 1.19
HSPG2-204ENST00000412328 SYNE4Q8N205 404 aa22.46■■□□□ 1.19
HSPG2-204ENST00000412328 RNF181Q9P0P0 153 aa22.46■■□□□ 1.19
HSPG2-204ENST00000412328 ZC3H4Q9UPT8 1303 aaKnown RBP22.46■■□□□ 1.19
HSPG2-204ENST00000412328 GTF2E1P29083 439 aaPredicted RBP22.45■■□□□ 1.18
HSPG2-204ENST00000412328 OLFM4Q6UX06 510 aa22.45■■□□□ 1.18
HSPG2-204ENST00000412328 LMNB1P20700 586 aa22.44■■□□□ 1.18
HSPG2-204ENST00000412328 TRIM28Q13263 835 aaKnown RBP22.44■■□□□ 1.18
HSPG2-204ENST00000412328 ZNF219Q9P2Y4 722 aaPredicted RBP22.44■■□□□ 1.18
HSPG2-204ENST00000412328 A0A1B0GUL6 1792 aa22.43■■□□□ 1.18
HSPG2-204ENST00000412328 SH3TC1Q8TE82 1336 aa22.43■■□□□ 1.18
HSPG2-204ENST00000412328 ATP5J2-PTCD1G3V325 749 aa22.42■■□□□ 1.18
HSPG2-204ENST00000412328 KIF3CO14782 793 aa22.42■■□□□ 1.18
HSPG2-204ENST00000412328 VAMP4O75379 141 aa22.42■■□□□ 1.18
HSPG2-204ENST00000412328 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
HSPG2-204ENST00000412328 GOLGA2Q08379 1002 aa22.42■■□□□ 1.18
HSPG2-204ENST00000412328 G2E3Q7L622 706 aa22.42■■□□□ 1.18
HSPG2-204ENST00000412328 ZNF526Q8TF50 670 aaPredicted RBP22.42■■□□□ 1.18
HSPG2-204ENST00000412328 GPBP1L1Q9HC44 474 aaPredicted RBP22.42■■□□□ 1.18
HSPG2-204ENST00000412328 ABCC4O15439 1325 aa22.41■■□□□ 1.18
HSPG2-204ENST00000412328 TCERG1O14776 1098 aaKnown RBP22.41■■□□□ 1.18
HSPG2-204ENST00000412328 CCDC93Q567U6 631 aa22.41■■□□□ 1.18
HSPG2-204ENST00000412328 SOGA3Q5TF21 947 aa22.41■■□□□ 1.18
HSPG2-204ENST00000412328 CRAMP1Q96RY5 1269 aa22.41■■□□□ 1.18
HSPG2-204ENST00000412328 TAOK3Q9H2K8 898 aa22.41■■□□□ 1.18
HSPG2-204ENST00000412328 ALDH1B1P30837 517 aa22.4■■□□□ 1.18
HSPG2-204ENST00000412328 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
HSPG2-204ENST00000412328 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
HSPG2-204ENST00000412328 SCN4AP35499 1836 aa22.4■■□□□ 1.18
HSPG2-204ENST00000412328 HCLS1P14317 486 aaPredicted RBP22.39■■□□□ 1.17
HSPG2-204ENST00000412328 CHMP4AQ9BY43 222 aa22.39■■□□□ 1.17
HSPG2-204ENST00000412328 RIC3Q7Z5B4 369 aa22.38■■□□□ 1.17
HSPG2-204ENST00000412328 RPGRQ92834 1020 aaKnown RBP22.38■■□□□ 1.17
HSPG2-204ENST00000412328 NLRP3Q96P20 1036 aa22.38■■□□□ 1.17
HSPG2-204ENST00000412328 MYD88Q99836 296 aa22.38■■□□□ 1.17
HSPG2-204ENST00000412328 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
HSPG2-204ENST00000412328 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 FKBP4Q02790 459 aaKnown RBP eCLIP22.37■■□□□ 1.17
HSPG2-204ENST00000412328 KSR2Q6VAB6 950 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 FAM89AQ96GI7 184 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 STK31Q9BXU1 1019 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 MYH16Q9H6N6 1097 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 NMRK2Q9NPI5 230 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 MAP3K2Q9Y2U5 619 aa22.37■■□□□ 1.17
HSPG2-204ENST00000412328 ADAMTSL1Q8N6G6 1762 aa22.36■■□□□ 1.17
HSPG2-204ENST00000412328 PI4KAP2A4QPH2 592 aa22.36■■□□□ 1.17
HSPG2-204ENST00000412328 C1QTNF8P60827 252 aa22.36■■□□□ 1.17
HSPG2-204ENST00000412328 FLIIQ13045 1269 aa22.36■■□□□ 1.17
HSPG2-204ENST00000412328 PI4KAP1Q8N8J0 262 aa22.36■■□□□ 1.17
HSPG2-204ENST00000412328 PPEF1O14829 653 aaPredicted RBP22.35■■□□□ 1.17
HSPG2-204ENST00000412328 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
HSPG2-204ENST00000412328 CCDC191Q8NCU4 936 aa22.35■■□□□ 1.17
HSPG2-204ENST00000412328 RBM17Q96I25 401 aaKnown RBP22.35■■□□□ 1.17
HSPG2-204ENST00000412328 ZNF646O15015 1829 aaPredicted RBP22.35■■□□□ 1.17
HSPG2-204ENST00000412328 PSME4Q14997 1843 aa22.35■■□□□ 1.17
HSPG2-204ENST00000412328 DDX58O95786 925 aaKnown RBP22.34■■□□□ 1.17
HSPG2-204ENST00000412328 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
HSPG2-204ENST00000412328 ZBTB38Q8NAP3 1195 aaPredicted RBP22.34■■□□□ 1.17
HSPG2-204ENST00000412328 PSMD1Q99460 953 aa22.34■■□□□ 1.17
HSPG2-204ENST00000412328 PCCAP05165 728 aaPredicted RBP22.32■■□□□ 1.16
HSPG2-204ENST00000412328 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
HSPG2-204ENST00000412328 RTKN2Q8IZC4 609 aa22.32■■□□□ 1.16
HSPG2-204ENST00000412328 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
HSPG2-204ENST00000412328 GLTPD2A6NH11 291 aa22.31■■□□□ 1.16
HSPG2-204ENST00000412328 IRS4O14654 1257 aaPredicted RBP22.31■■□□□ 1.16
HSPG2-204ENST00000412328 ZNF277Q9NRM2 450 aaPredicted RBP22.31■■□□□ 1.16
HSPG2-204ENST00000412328 CWC25Q9NXE8 425 aaPredicted RBP22.31■■□□□ 1.16
HSPG2-204ENST00000412328 ATP6V0A2Q9Y487 856 aa22.31■■□□□ 1.16
HSPG2-204ENST00000412328 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
HSPG2-204ENST00000412328 NEURL1BA8MQ27 555 aa22.3■■□□□ 1.16
HSPG2-204ENST00000412328 SLFN5Q08AF3 891 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms