RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 JCADQ9P266 1359 aa19.94■□□□□ 0.78
LIMS2-208ENST00000410011 SETD1BQ9UPS6 1966 aaKnown RBP19.94■□□□□ 0.78
LIMS2-208ENST00000410011 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
LIMS2-208ENST00000410011 KIAA2012Q0VF49 1180 aa19.93■□□□□ 0.78
LIMS2-208ENST00000410011 ST3GAL1Q11201 340 aa19.93■□□□□ 0.78
LIMS2-208ENST00000410011 RNF20Q5VTR2 975 aa19.93■□□□□ 0.78
LIMS2-208ENST00000410011 BICC1Q9H694 974 aaKnown RBP19.93■□□□□ 0.78
LIMS2-208ENST00000410011 PDCP20941 246 aa19.93■□□□□ 0.78
LIMS2-208ENST00000410011 LARP1Q6PKG0 1096 aaKnown RBP19.93■□□□□ 0.78
LIMS2-208ENST00000410011 MST1RQ04912 1400 aa19.93■□□□□ 0.78
LIMS2-208ENST00000410011 LARP6Q9BRS8 491 aaKnown RBP19.92■□□□□ 0.78
LIMS2-208ENST00000410011 HMG20BQ9P0W2 317 aa19.92■□□□□ 0.78
LIMS2-208ENST00000410011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.92■□□□□ 0.78
LIMS2-208ENST00000410011 ELP1O95163 1332 aa19.92■□□□□ 0.78
LIMS2-208ENST00000410011 SLC27A2O14975 620 aa19.92■□□□□ 0.78
LIMS2-208ENST00000410011 NMIQ13287 307 aaPredicted RBP19.92■□□□□ 0.78
LIMS2-208ENST00000410011 MAP7D2Q96T17 732 aa19.92■□□□□ 0.78
LIMS2-208ENST00000410011 MED23Q9ULK4 1368 aa19.91■□□□□ 0.78
LIMS2-208ENST00000410011 FIBPO43427 364 aa19.91■□□□□ 0.78
LIMS2-208ENST00000410011 KDM4AO75164 1064 aa19.91■□□□□ 0.78
LIMS2-208ENST00000410011 DNM1Q05193 864 aaKnown RBP19.91■□□□□ 0.78
LIMS2-208ENST00000410011 TPCN1Q9ULQ1 816 aa19.91■□□□□ 0.78
LIMS2-208ENST00000410011 SASS6Q6UVJ0 657 aa19.91■□□□□ 0.78
LIMS2-208ENST00000410011 DYNC1I1O14576 645 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 IGKV5-2P06315 115 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 FAM227BQ96M60 508 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 COL15A1P39059 1388 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 PLEKHG2Q9H7P9 1386 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 NPHP4O75161 1426 aaPredicted RBP19.9■□□□□ 0.78
LIMS2-208ENST00000410011 ADCY5O95622 1261 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
LIMS2-208ENST00000410011 PIBF1Q8WXW3 757 aa19.9■□□□□ 0.78
LIMS2-208ENST00000410011 ZNF142P52746 1687 aaPredicted RBP19.89■□□□□ 0.78
LIMS2-208ENST00000410011 PRAMEF22A3QJZ6 481 aa19.89■□□□□ 0.77
LIMS2-208ENST00000410011 USP25Q9UHP3 1055 aa19.89■□□□□ 0.77
LIMS2-208ENST00000410011 RFX7Q2KHR2 1363 aa19.89■□□□□ 0.77
LIMS2-208ENST00000410011 KCNJ4P48050 445 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 NEXNQ0ZGT2 675 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 USPL1Q5W0Q7 1092 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 LARP1BQ659C4 914 aaKnown RBP19.88■□□□□ 0.77
LIMS2-208ENST00000410011 ZBTB7CA1YPR0 619 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 NEURL1BA8MQ27 555 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 KRT85P78386 507 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 BLOC1S2Q6QNY1 142 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 COPRSQ9NQ92 184 aa19.88■□□□□ 0.77
LIMS2-208ENST00000410011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.88■□□□□ 0.77
LIMS2-208ENST00000410011 RPS6KB1P23443 525 aa19.87■□□□□ 0.77
LIMS2-208ENST00000410011 CCDC8Q9H0W5 538 aaPredicted RBP19.87■□□□□ 0.77
LIMS2-208ENST00000410011 UQCRHLA0A096LP55 91 aa19.87■□□□□ 0.77
LIMS2-208ENST00000410011 TPM3P06753 285 aa19.87■□□□□ 0.77
LIMS2-208ENST00000410011 UQCRHP07919 91 aa19.87■□□□□ 0.77
LIMS2-208ENST00000410011 GCKRQ14397 625 aa19.87■□□□□ 0.77
LIMS2-208ENST00000410011 RIC3Q7Z5B4 369 aa19.87■□□□□ 0.77
LIMS2-208ENST00000410011 MTERF4Q7Z6M4 381 aaKnown RBP19.87■□□□□ 0.77
LIMS2-208ENST00000410011 METTL22Q9BUU2 404 aaPredicted RBP19.87■□□□□ 0.77
LIMS2-208ENST00000410011 A0A0D9SFI3 127 aa19.86■□□□□ 0.77
LIMS2-208ENST00000410011 KRT32Q14532 448 aa19.86■□□□□ 0.77
LIMS2-208ENST00000410011 FSD1Q9BTV5 496 aa19.86■□□□□ 0.77
LIMS2-208ENST00000410011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
LIMS2-208ENST00000410011 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
LIMS2-208ENST00000410011 ATP5JP18859 108 aa19.86■□□□□ 0.77
LIMS2-208ENST00000410011 SLC52A2Q9HAB3 445 aa19.86■□□□□ 0.77
LIMS2-208ENST00000410011 TRPM3Q9HCF6 1732 aaPredicted RBP19.86■□□□□ 0.77
LIMS2-208ENST00000410011 ABCC6O95255 1503 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 CCDC192P0DO97 292 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 TICAM2Q86XR7 235 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 NECAB1Q8N987 351 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 SCAND2PQ9GZW5 306 aaPredicted RBP19.85■□□□□ 0.77
LIMS2-208ENST00000410011 BOLA2Q9H3K6 86 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 ERBB3P21860 1342 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 VPS37CA5D8V6 355 aaPredicted RBP19.85■□□□□ 0.77
LIMS2-208ENST00000410011 ORAI2Q96SN7 254 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 SPTLC3Q9NUV7 552 aa19.85■□□□□ 0.77
LIMS2-208ENST00000410011 TLR7Q9NYK1 1049 aaKnown RBP19.85■□□□□ 0.77
LIMS2-208ENST00000410011 TAF5LO75529 589 aa19.84■□□□□ 0.77
LIMS2-208ENST00000410011 PRIMPOLQ96LW4 560 aa19.84■□□□□ 0.77
LIMS2-208ENST00000410011 AIMP1Q12904 312 aaKnown RBP19.84■□□□□ 0.77
LIMS2-208ENST00000410011 TOB2Q14106 344 aaPredicted RBP19.84■□□□□ 0.77
LIMS2-208ENST00000410011 TTC6Q86TZ1 520 aa19.84■□□□□ 0.77
LIMS2-208ENST00000410011 NPHP3Q7Z494 1330 aa19.83■□□□□ 0.77
LIMS2-208ENST00000410011 NOLC1Q14978 699 aaKnown RBP eCLIP19.83■□□□□ 0.76
LIMS2-208ENST00000410011 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.76
LIMS2-208ENST00000410011 SCN11AQ9UI33 1791 aa19.83■□□□□ 0.76
LIMS2-208ENST00000410011 LRP10Q7Z4F1 713 aa19.82■□□□□ 0.76
LIMS2-208ENST00000410011 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
LIMS2-208ENST00000410011 RFX5P48382 616 aaPredicted RBP19.82■□□□□ 0.76
LIMS2-208ENST00000410011 HMGN5P82970 282 aaKnown RBP19.81■□□□□ 0.76
LIMS2-208ENST00000410011 CDC37L1Q7L3B6 337 aa19.81■□□□□ 0.76
LIMS2-208ENST00000410011 XAGE3Q8WTP9 111 aa19.81■□□□□ 0.76
LIMS2-208ENST00000410011 KDM6AO15550 1401 aaPredicted RBP19.81■□□□□ 0.76
LIMS2-208ENST00000410011 RBM43Q6ZSC3 357 aaKnown RBP19.81■□□□□ 0.76
LIMS2-208ENST00000410011 ANKRD13DQ6ZTN6 518 aa19.81■□□□□ 0.76
LIMS2-208ENST00000410011 COPS6Q7L5N1 327 aa19.81■□□□□ 0.76
LIMS2-208ENST00000410011 KRT28Q7Z3Y7 464 aa19.81■□□□□ 0.76
LIMS2-208ENST00000410011 KIF1AQ12756 1690 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 MAP3K11Q16584 847 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 EPHA10Q5JZY3 1008 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 ZNF589Q86UQ0 364 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms