RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 PI4KAP2A4QPH2 592 aa20.99■□□□□ 0.95
GCFC2-202ENST00000409857 PI4KAP1Q8N8J0 262 aa20.99■□□□□ 0.95
GCFC2-202ENST00000409857 HLFQ16534 295 aa20.99■□□□□ 0.95
GCFC2-202ENST00000409857 TBC1D32Q96NH3 1257 aa20.98■□□□□ 0.95
GCFC2-202ENST00000409857 API5Q9BZZ5 524 aaKnown RBP20.98■□□□□ 0.95
GCFC2-202ENST00000409857 MAP3K2Q9Y2U5 619 aa20.98■□□□□ 0.95
GCFC2-202ENST00000409857 AFDNP55196 1824 aaKnown RBP20.98■□□□□ 0.95
GCFC2-202ENST00000409857 METTL22Q9BUU2 404 aaPredicted RBP20.98■□□□□ 0.95
GCFC2-202ENST00000409857 MTFR1LQ9H019 292 aa20.98■□□□□ 0.95
GCFC2-202ENST00000409857 ANTXR1Q9H6X2 564 aa20.98■□□□□ 0.95
GCFC2-202ENST00000409857 DNAAF4Q8WXU2 420 aa20.97■□□□□ 0.95
GCFC2-202ENST00000409857 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
GCFC2-202ENST00000409857 TBC1D2Q9BYX2 928 aa20.97■□□□□ 0.95
GCFC2-202ENST00000409857 ZNF34Q8IZ26 560 aa20.96■□□□□ 0.95
GCFC2-202ENST00000409857 SPRYD3Q8NCJ5 442 aa20.96■□□□□ 0.95
GCFC2-202ENST00000409857 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
GCFC2-202ENST00000409857 UPF2Q9HAU5 1272 aaKnown RBP20.96■□□□□ 0.95
GCFC2-202ENST00000409857 NRXN2Q9P2S2 1712 aa20.96■□□□□ 0.95
GCFC2-202ENST00000409857 TM4SF1P30408 202 aa20.96■□□□□ 0.95
GCFC2-202ENST00000409857 ZKSCAN2Q63HK3 967 aa20.96■□□□□ 0.95
GCFC2-202ENST00000409857 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
GCFC2-202ENST00000409857 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.94
GCFC2-202ENST00000409857 TRIM28Q13263 835 aaKnown RBP20.95■□□□□ 0.94
GCFC2-202ENST00000409857 MVPQ14764 893 aaKnown RBP20.95■□□□□ 0.94
GCFC2-202ENST00000409857 TBC1D9BQ66K14 1250 aa20.95■□□□□ 0.94
GCFC2-202ENST00000409857 UBE2Q2Q8WVN8 375 aa20.95■□□□□ 0.94
GCFC2-202ENST00000409857 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
GCFC2-202ENST00000409857 NEXNQ0ZGT2 675 aa20.94■□□□□ 0.94
GCFC2-202ENST00000409857 AAMPQ13685 434 aa20.94■□□□□ 0.94
GCFC2-202ENST00000409857 NFIXQ14938 502 aa20.93■□□□□ 0.94
GCFC2-202ENST00000409857 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
GCFC2-202ENST00000409857 F6X3S4 739 aa20.93■□□□□ 0.94
GCFC2-202ENST00000409857 TRIM27P14373 513 aa20.93■□□□□ 0.94
GCFC2-202ENST00000409857 PARP10Q53GL7 1025 aa20.93■□□□□ 0.94
GCFC2-202ENST00000409857 SETDB2Q96T68 719 aa20.93■□□□□ 0.94
GCFC2-202ENST00000409857 NIP7Q9Y221 180 aaKnown RBP eCLIP20.93■□□□□ 0.94
GCFC2-202ENST00000409857 ABCC4O15439 1325 aa20.92■□□□□ 0.94
GCFC2-202ENST00000409857 FTSJ3Q8IY81 847 aaKnown RBP20.92■□□□□ 0.94
GCFC2-202ENST00000409857 MYD88Q99836 296 aa20.92■□□□□ 0.94
GCFC2-202ENST00000409857 ZBTB7AO95365 584 aa20.92■□□□□ 0.94
GCFC2-202ENST00000409857 LINS1Q8NG48 757 aa20.92■□□□□ 0.94
GCFC2-202ENST00000409857 BEND3Q5T5X7 828 aa20.91■□□□□ 0.94
GCFC2-202ENST00000409857 MSL1Q68DK7 614 aa20.91■□□□□ 0.94
GCFC2-202ENST00000409857 DZIP1LQ8IYY4 767 aaKnown RBP20.91■□□□□ 0.94
GCFC2-202ENST00000409857 CCDC191Q8NCU4 936 aa20.91■□□□□ 0.94
GCFC2-202ENST00000409857 UBN2Q6ZU65 1347 aa20.9■□□□□ 0.94
GCFC2-202ENST00000409857 NLRP10Q86W26 655 aa20.9■□□□□ 0.94
GCFC2-202ENST00000409857 POLRMTO00411 1230 aaKnown RBP20.89■□□□□ 0.94
GCFC2-202ENST00000409857 IGKV5-2P06315 115 aa20.89■□□□□ 0.94
GCFC2-202ENST00000409857 MMP10P09238 476 aa20.89■□□□□ 0.94
GCFC2-202ENST00000409857 ALDH1L1O75891 902 aa20.89■□□□□ 0.93
GCFC2-202ENST00000409857 CCT4P50991 539 aaKnown RBP20.89■□□□□ 0.93
GCFC2-202ENST00000409857 DDR1Q08345 913 aa20.89■□□□□ 0.93
GCFC2-202ENST00000409857 SGIP1Q9BQI5 828 aa20.89■□□□□ 0.93
GCFC2-202ENST00000409857 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 GPTP24298 496 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 INTS3Q68E01 1043 aaKnown RBP20.88■□□□□ 0.93
GCFC2-202ENST00000409857 SLC4A10Q6U841 1118 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 BICDL1Q6ZP65 573 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 PPP1R42Q7Z4L9 355 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 SRCIN1Q9C0H9 1055 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
GCFC2-202ENST00000409857 ATP5J2-PTCD1G3V325 749 aa20.87■□□□□ 0.93
GCFC2-202ENST00000409857 POLD1P28340 1107 aa20.87■□□□□ 0.93
GCFC2-202ENST00000409857 NYXQ9GZU5 481 aa20.87■□□□□ 0.93
GCFC2-202ENST00000409857 SPON1Q9HCB6 807 aa20.87■□□□□ 0.93
GCFC2-202ENST00000409857 CWC25Q9NXE8 425 aaPredicted RBP20.87■□□□□ 0.93
GCFC2-202ENST00000409857 LAMB2P55268 1798 aa20.87■□□□□ 0.93
GCFC2-202ENST00000409857 KIF13BQ9NQT8 1826 aa20.87■□□□□ 0.93
GCFC2-202ENST00000409857 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
GCFC2-202ENST00000409857 ATF5Q9Y2D1 282 aaPredicted RBP20.87■□□□□ 0.93
GCFC2-202ENST00000409857 LRP5O75197 1615 aa20.86■□□□□ 0.93
GCFC2-202ENST00000409857 SERPINB2P05120 415 aa20.86■□□□□ 0.93
GCFC2-202ENST00000409857 PTGER2P43116 358 aa20.86■□□□□ 0.93
GCFC2-202ENST00000409857 SUSD4Q5VX71 490 aa20.86■□□□□ 0.93
GCFC2-202ENST00000409857 CWF19L2Q2TBE0 894 aaKnown RBP20.85■□□□□ 0.93
GCFC2-202ENST00000409857 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
GCFC2-202ENST00000409857 NTSR2O95665 410 aa20.85■□□□□ 0.93
GCFC2-202ENST00000409857 GCKRQ14397 625 aa20.85■□□□□ 0.93
GCFC2-202ENST00000409857 TPTE2Q6XPS3 522 aa20.85■□□□□ 0.93
GCFC2-202ENST00000409857 NBPF5PQ86XG9 351 aaPredicted RBP20.85■□□□□ 0.93
GCFC2-202ENST00000409857 ITPRIPQ8IWB1 547 aa20.85■□□□□ 0.93
GCFC2-202ENST00000409857 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
GCFC2-202ENST00000409857 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
GCFC2-202ENST00000409857 RIC1Q4ADV7 1423 aa20.84■□□□□ 0.93
GCFC2-202ENST00000409857 ZBTB38Q8NAP3 1195 aaPredicted RBP20.83■□□□□ 0.93
GCFC2-202ENST00000409857 FAM43AQ8N2R8 423 aa20.83■□□□□ 0.92
GCFC2-202ENST00000409857 PCCAP05165 728 aaPredicted RBP20.82■□□□□ 0.92
GCFC2-202ENST00000409857 CNBD1Q8NA66 436 aa20.82■□□□□ 0.92
GCFC2-202ENST00000409857 ANKRD31Q8N7Z5 1873 aa20.82■□□□□ 0.92
GCFC2-202ENST00000409857 PRR5LQ6MZQ0 368 aa20.82■□□□□ 0.92
GCFC2-202ENST00000409857 TMEM57Q8N5G2 664 aa20.82■□□□□ 0.92
GCFC2-202ENST00000409857 TRMT112Q9UI30 125 aaKnown RBP20.82■□□□□ 0.92
GCFC2-202ENST00000409857 UTYO14607 1347 aa20.82■□□□□ 0.92
GCFC2-202ENST00000409857 SH3TC1Q8TE82 1336 aa20.82■□□□□ 0.92
GCFC2-202ENST00000409857 H7C1W4 665 aa20.81■□□□□ 0.92
GCFC2-202ENST00000409857 MYH3P11055 1940 aa20.81■□□□□ 0.92
GCFC2-202ENST00000409857 CDHR2Q9BYE9 1310 aa20.81■□□□□ 0.92
GCFC2-202ENST00000409857 C10orf71Q711Q0 1435 aa20.81■□□□□ 0.92
GCFC2-202ENST00000409857 SLC10A5Q5PT55 438 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms