RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
CXCR4-202ENST00000409817 SCN11AQ9UI33 1791 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 PKD1L3Q7Z443 1732 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 ZNF335Q9H4Z2 1342 aaPredicted RBP9.3□□□□□ -0.92
CXCR4-202ENST00000409817 F6X3S4 739 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 OATP04181 439 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 BECN1Q14457 450 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 DDX17Q92841 729 aaKnown RBP9.3□□□□□ -0.92
CXCR4-202ENST00000409817 HDAC5Q9UQL6 1122 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 MRC1P22897 1456 aa9.29□□□□□ -0.92
CXCR4-202ENST00000409817 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
CXCR4-202ENST00000409817 PHKG2P15735 406 aa9.29□□□□□ -0.92
CXCR4-202ENST00000409817 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
CXCR4-202ENST00000409817 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
CXCR4-202ENST00000409817 BEGAINQ9BUH8 593 aa9.29□□□□□ -0.92
CXCR4-202ENST00000409817 SLC52A2Q9HAB3 445 aa9.29□□□□□ -0.92
CXCR4-202ENST00000409817 IBTKQ9P2D0 1353 aaPredicted RBP9.29□□□□□ -0.92
CXCR4-202ENST00000409817 MEGF6O75095 1541 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 DOK7Q18PE1 504 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 SRCIN1Q9C0H9 1055 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 FAM198AQ9UFP1 575 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 WDR17Q8IZU2 1322 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 PARP4Q9UKK3 1724 aaKnown RBP9.28□□□□□ -0.92
CXCR4-202ENST00000409817 EIF2S2P20042 333 aaKnown RBP9.28□□□□□ -0.92
CXCR4-202ENST00000409817 ATP8B2P98198 1209 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 CABLES1Q8TDN4 633 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 DNAAF4Q8WXU2 420 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
CXCR4-202ENST00000409817 PRDM11Q9NQV5 511 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 CHPF2Q9P2E5 772 aa9.28□□□□□ -0.92
CXCR4-202ENST00000409817 KDM6AO15550 1401 aaPredicted RBP9.27□□□□□ -0.93
CXCR4-202ENST00000409817 UBTFL1P0CB47 393 aaPredicted RBP9.27□□□□□ -0.93
CXCR4-202ENST00000409817 PRSS12P56730 875 aa9.27□□□□□ -0.93
CXCR4-202ENST00000409817 ZNF790Q6PG37 636 aa9.27□□□□□ -0.93
CXCR4-202ENST00000409817 PLEKHM2Q8IWE5 1019 aa9.27□□□□□ -0.93
CXCR4-202ENST00000409817 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
CXCR4-202ENST00000409817 ZSWIM6Q9HCJ5 1215 aa9.27□□□□□ -0.93
CXCR4-202ENST00000409817 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
CXCR4-202ENST00000409817 KCNQ3O43525 872 aa9.26□□□□□ -0.93
CXCR4-202ENST00000409817 ALDH1L1O75891 902 aa9.26□□□□□ -0.93
CXCR4-202ENST00000409817 DDX58O95786 925 aaKnown RBP9.26□□□□□ -0.93
CXCR4-202ENST00000409817 C22orf23Q9BZE7 217 aa9.26□□□□□ -0.93
CXCR4-202ENST00000409817 USP44Q9H0E7 712 aa9.26□□□□□ -0.93
CXCR4-202ENST00000409817 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
CXCR4-202ENST00000409817 PHAXQ9H814 394 aaKnown RBP9.26□□□□□ -0.93
CXCR4-202ENST00000409817 COL5A2P05997 1499 aaPredicted RBP9.26□□□□□ -0.93
CXCR4-202ENST00000409817 CDC45O75419 566 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 COL9A1P20849 921 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
CXCR4-202ENST00000409817 CHRNA2Q15822 529 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
CXCR4-202ENST00000409817 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 PI4KAP2A4QPH2 592 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 RBM25P49756 843 aaKnown RBP9.25□□□□□ -0.93
CXCR4-202ENST00000409817 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 TTC22Q5TAA0 569 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 KSR2Q6VAB6 950 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 PI4KAP1Q8N8J0 262 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 PROCA1Q8NCQ7 364 aaPredicted RBP9.25□□□□□ -0.93
CXCR4-202ENST00000409817 CARD10Q9BWT7 1032 aa9.25□□□□□ -0.93
CXCR4-202ENST00000409817 C3orf80F5H4A9 247 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 CYP27B1O15528 508 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 RAB11FIP3O75154 756 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
CXCR4-202ENST00000409817 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 SSH3Q8TE77 659 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 LRRCC1Q9C099 1032 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 ADCY9O60503 1353 aa9.24□□□□□ -0.93
CXCR4-202ENST00000409817 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
CXCR4-202ENST00000409817 HSP90AB4PQ58FF6 505 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 CASC1Q6TDU7 716 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 TOM1L2Q6ZVM7 507 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 LRRFIP2Q9Y608 721 aaKnown RBP9.23□□□□□ -0.93
CXCR4-202ENST00000409817 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 MTX1Q13505 466 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 LINS1Q8NG48 757 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 ZCRB1Q8TBF4 217 aaKnown RBP9.23□□□□□ -0.93
CXCR4-202ENST00000409817 FMNL2Q96PY5 1086 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 AOX1Q06278 1338 aa9.23□□□□□ -0.93
CXCR4-202ENST00000409817 IL2RBP14784 551 aa9.22□□□□□ -0.93
CXCR4-202ENST00000409817 GSPT1P15170 499 aaKnown RBP9.22□□□□□ -0.93
CXCR4-202ENST00000409817 CABP4P57796 275 aa9.22□□□□□ -0.93
CXCR4-202ENST00000409817 MCM6Q14566 821 aa9.22□□□□□ -0.93
CXCR4-202ENST00000409817 TBC1D9Q6ZT07 1266 aa9.22□□□□□ -0.93
CXCR4-202ENST00000409817 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.22□□□□□ -0.93
CXCR4-202ENST00000409817 PNMA6EA0A0J9YXQ4 647 aa9.21□□□□□ -0.93
CXCR4-202ENST00000409817 RIMBP2O15034 1052 aa9.21□□□□□ -0.93
CXCR4-202ENST00000409817 RTL5Q5HYW3 569 aaPredicted RBP9.21□□□□□ -0.93
CXCR4-202ENST00000409817 LARP1Q6PKG0 1096 aaKnown RBP9.21□□□□□ -0.93
CXCR4-202ENST00000409817 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.93
CXCR4-202ENST00000409817 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.93
CXCR4-202ENST00000409817 TSKSQ9UJT2 592 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms