RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SERPINB2P05120 415 aa21.05■□□□□ 0.96
SUMO1-208ENST00000409627 PTGER2P43116 358 aa21.05■□□□□ 0.96
SUMO1-208ENST00000409627 CCT4P50991 539 aaKnown RBP21.05■□□□□ 0.96
SUMO1-208ENST00000409627 SUSD4Q5VX71 490 aa21.05■□□□□ 0.96
SUMO1-208ENST00000409627 DZIP1LQ8IYY4 767 aaKnown RBP21.05■□□□□ 0.96
SUMO1-208ENST00000409627 NYXQ9GZU5 481 aa21.05■□□□□ 0.96
SUMO1-208ENST00000409627 CWC25Q9NXE8 425 aaPredicted RBP21.05■□□□□ 0.96
SUMO1-208ENST00000409627 LRP5O75197 1615 aa21.04■□□□□ 0.96
SUMO1-208ENST00000409627 KIF13BQ9NQT8 1826 aa21.04■□□□□ 0.96
SUMO1-208ENST00000409627 PLIN1O60240 522 aa21.04■□□□□ 0.96
SUMO1-208ENST00000409627 NTSR2O95665 410 aa21.04■□□□□ 0.96
SUMO1-208ENST00000409627 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
SUMO1-208ENST00000409627 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
SUMO1-208ENST00000409627 FTSJ3Q8IY81 847 aaKnown RBP21.04■□□□□ 0.96
SUMO1-208ENST00000409627 CLUAP1Q96AJ1 413 aa21.04■□□□□ 0.96
SUMO1-208ENST00000409627 GCKRQ14397 625 aa21.03■□□□□ 0.96
SUMO1-208ENST00000409627 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
SUMO1-208ENST00000409627 DDX60Q8IY21 1712 aaKnown RBP21.03■□□□□ 0.96
SUMO1-208ENST00000409627 PDE3AQ14432 1141 aa21.02■□□□□ 0.96
SUMO1-208ENST00000409627 TPTE2Q6XPS3 522 aa21.02■□□□□ 0.96
SUMO1-208ENST00000409627 CNBD1Q8NA66 436 aa21.02■□□□□ 0.96
SUMO1-208ENST00000409627 ANKRD31Q8N7Z5 1873 aa21.02■□□□□ 0.96
SUMO1-208ENST00000409627 FAM177BA6PVY3 158 aa21.01■□□□□ 0.95
SUMO1-208ENST00000409627 RLBP1P12271 317 aa21.01■□□□□ 0.95
SUMO1-208ENST00000409627 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
SUMO1-208ENST00000409627 TMEM57Q8N5G2 664 aa21.01■□□□□ 0.95
SUMO1-208ENST00000409627 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
SUMO1-208ENST00000409627 RIC1Q4ADV7 1423 aa21.01■□□□□ 0.95
SUMO1-208ENST00000409627 PCCAP05165 728 aaPredicted RBP21■□□□□ 0.95
SUMO1-208ENST00000409627 ZBTB38Q8NAP3 1195 aaPredicted RBP21■□□□□ 0.95
SUMO1-208ENST00000409627 C10orf71Q711Q0 1435 aa21■□□□□ 0.95
SUMO1-208ENST00000409627 SH3TC1Q8TE82 1336 aa21■□□□□ 0.95
SUMO1-208ENST00000409627 ST5P78524 1137 aa20.99■□□□□ 0.95
SUMO1-208ENST00000409627 PANK1Q8TE04 598 aa20.99■□□□□ 0.95
SUMO1-208ENST00000409627 SUPT16HQ9Y5B9 1047 aaKnown RBP20.99■□□□□ 0.95
SUMO1-208ENST00000409627 MYH3P11055 1940 aa20.99■□□□□ 0.95
SUMO1-208ENST00000409627 TNRC6CQ9HCJ0 1690 aaKnown RBP20.99■□□□□ 0.95
SUMO1-208ENST00000409627 ABCC12Q96J65 1359 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 H7C1W4 665 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 GRM8O00222 908 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 NPHP1O15259 732 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 GTF2E1P29083 439 aaPredicted RBP20.98■□□□□ 0.95
SUMO1-208ENST00000409627 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 UTYO14607 1347 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 CDHR2Q9BYE9 1310 aa20.98■□□□□ 0.95
SUMO1-208ENST00000409627 ERFEQ4G0M1 354 aa20.97■□□□□ 0.95
SUMO1-208ENST00000409627 C20orf194Q5TEA3 1177 aa20.97■□□□□ 0.95
SUMO1-208ENST00000409627 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
SUMO1-208ENST00000409627 C9orf78Q9NZ63 289 aaPredicted RBP20.97■□□□□ 0.95
SUMO1-208ENST00000409627 CASP7P55210 303 aa20.96■□□□□ 0.95
SUMO1-208ENST00000409627 SLC10A5Q5PT55 438 aa20.96■□□□□ 0.95
SUMO1-208ENST00000409627 UBE3BQ7Z3V4 1068 aa20.96■□□□□ 0.95
SUMO1-208ENST00000409627 ITPRIPQ8IWB1 547 aa20.96■□□□□ 0.95
SUMO1-208ENST00000409627 USP44Q9H0E7 712 aa20.96■□□□□ 0.95
SUMO1-208ENST00000409627 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
SUMO1-208ENST00000409627 MVPQ14764 893 aaKnown RBP20.95■□□□□ 0.94
SUMO1-208ENST00000409627 DLEC1Q9Y238 1755 aa20.95■□□□□ 0.94
SUMO1-208ENST00000409627 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
SUMO1-208ENST00000409627 HSP90B1P14625 803 aaKnown RBP20.94■□□□□ 0.94
SUMO1-208ENST00000409627 RTL5Q5HYW3 569 aaPredicted RBP20.94■□□□□ 0.94
SUMO1-208ENST00000409627 SYNE4Q8N205 404 aa20.94■□□□□ 0.94
SUMO1-208ENST00000409627 BRIP1Q9BX63 1249 aa20.94■□□□□ 0.94
SUMO1-208ENST00000409627 COL11A2P13942 1736 aaPredicted RBP20.94■□□□□ 0.94
SUMO1-208ENST00000409627 NBPF7P0C2Y1 421 aaPredicted RBP20.93■□□□□ 0.94
SUMO1-208ENST00000409627 CCDC24Q8N4L8 307 aa20.93■□□□□ 0.94
SUMO1-208ENST00000409627 JARID2Q92833 1246 aaPredicted RBP20.93■□□□□ 0.94
SUMO1-208ENST00000409627 COG6Q9Y2V7 657 aa20.93■□□□□ 0.94
SUMO1-208ENST00000409627 GNAI3P08754 354 aa20.92■□□□□ 0.94
SUMO1-208ENST00000409627 MEIS3Q99687 375 aa20.92■□□□□ 0.94
SUMO1-208ENST00000409627 PLA2G12BQ9BX93 195 aa20.92■□□□□ 0.94
SUMO1-208ENST00000409627 DDX19BQ9UMR2 479 aa20.92■□□□□ 0.94
SUMO1-208ENST00000409627 CD2APQ9Y5K6 639 aa20.92■□□□□ 0.94
SUMO1-208ENST00000409627 PDE8AO60658 829 aa20.91■□□□□ 0.94
SUMO1-208ENST00000409627 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
SUMO1-208ENST00000409627 PDE6BP35913 854 aa20.91■□□□□ 0.94
SUMO1-208ENST00000409627 KLRG2A4D1S0 409 aaPredicted RBP20.9■□□□□ 0.94
SUMO1-208ENST00000409627 ZBTB7BO15156 539 aaPredicted RBP20.9■□□□□ 0.94
SUMO1-208ENST00000409627 UBTFL1P0CB47 393 aaPredicted RBP20.9■□□□□ 0.94
SUMO1-208ENST00000409627 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
SUMO1-208ENST00000409627 PPP1R1BQ9UD71 204 aaPredicted RBP20.9■□□□□ 0.94
SUMO1-208ENST00000409627 PDZRN3Q9UPQ7 1066 aa20.9■□□□□ 0.94
SUMO1-208ENST00000409627 HDAC5Q9UQL6 1122 aa20.9■□□□□ 0.94
SUMO1-208ENST00000409627 SUCLG2Q96I99 432 aa20.89■□□□□ 0.93
SUMO1-208ENST00000409627 CHMP4BQ9H444 224 aaKnown RBP20.89■□□□□ 0.93
SUMO1-208ENST00000409627 BRCA1P38398 1863 aaKnown RBP20.88■□□□□ 0.93
SUMO1-208ENST00000409627 TGFB2P61812 414 aa20.88■□□□□ 0.93
SUMO1-208ENST00000409627 CRY2Q49AN0 593 aa20.88■□□□□ 0.93
SUMO1-208ENST00000409627 CTSWP56202 376 aa20.87■□□□□ 0.93
SUMO1-208ENST00000409627 SF3B3Q15393 1217 aaKnown RBP20.87■□□□□ 0.93
SUMO1-208ENST00000409627 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
SUMO1-208ENST00000409627 KAZALD1Q96I82 304 aa20.87■□□□□ 0.93
SUMO1-208ENST00000409627 FOXO4P98177 505 aa20.86■□□□□ 0.93
SUMO1-208ENST00000409627 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
SUMO1-208ENST00000409627 FHDC1Q9C0D6 1143 aaPredicted RBP20.86■□□□□ 0.93
SUMO1-208ENST00000409627 GNAI2P04899 355 aa20.85■□□□□ 0.93
SUMO1-208ENST00000409627 SRGNP10124 158 aa20.85■□□□□ 0.93
SUMO1-208ENST00000409627 RABL6Q3YEC7 729 aaPredicted RBP20.85■□□□□ 0.93
SUMO1-208ENST00000409627 EPHA10Q5JZY3 1008 aa20.85■□□□□ 0.93
SUMO1-208ENST00000409627 C2CD5Q86YS7 1000 aa20.85■□□□□ 0.93
SUMO1-208ENST00000409627 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms