RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 LOC102724159A0A0B4J2E5 919 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 BECN2A8MW95 431 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 IQCB1Q15051 598 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 PWP2Q15269 919 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC83Q8IWF9 413 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 OSBPL5Q9H0X9 879 aaPredicted RBP6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 CCT4P50991 539 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 AEBP2Q6ZN18 517 aaPredicted RBP6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 ZBTB9Q96C00 473 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 CABP2Q9NPB3 220 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 CHMP3Q9Y3E7 222 aa6.84□□□□□ -1.31
R3HDM1-202ENST00000409478 PPLO60437 1756 aa6.84□□□□□ -1.32
R3HDM1-202ENST00000409478 ARHGEF28Q8N1W1 1705 aaKnown RBP6.84□□□□□ -1.32
R3HDM1-202ENST00000409478 GNAI2P04899 355 aa6.84□□□□□ -1.32
R3HDM1-202ENST00000409478 LARP1BQ659C4 914 aaKnown RBP6.84□□□□□ -1.32
R3HDM1-202ENST00000409478 PHACTR3Q96KR7 559 aa6.84□□□□□ -1.32
R3HDM1-202ENST00000409478 LCMT1Q9UIC8 334 aa6.84□□□□□ -1.32
R3HDM1-202ENST00000409478 YTHDC2Q9H6S0 1430 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 SGSM2O43147 1006 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 ARID5BQ14865 1188 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 PPM1EQ8WY54 764 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 TMX1Q9H3N1 280 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 TSHZ3Q63HK5 1081 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 BICD2Q8TD16 824 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 SIRT1Q96EB6 747 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 TM6SF1Q9BZW5 370 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 PDRG1Q9NUG6 133 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 DNAI1Q9UI46 699 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 EXOC6BQ9Y2D4 811 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 TTC41PQ6P2S7 1318 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 RPS6KA5O75582 802 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 TBC1D8O95759 1140 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 ATP2B1P20020 1258 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 LMAN1P49257 510 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 GYS2P54840 703 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 CCDC91Q7Z6B0 441 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 GPR161Q8N6U8 529 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 NAT10Q9H0A0 1025 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 USP16Q9Y5T5 823 aa6.83□□□□□ -1.32
R3HDM1-202ENST00000409478 GIGYF1O75420 1035 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 TADA3O75528 432 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 LRRFIP1Q32MZ4 808 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 CC2D1AQ6P1N0 951 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 HDGFL2Q7Z4V5 671 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 LEO1Q8WVC0 666 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 LSG1Q9H089 658 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 ARFGAP3Q9NP61 516 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 ADAM21Q9UKJ8 722 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 ERCC6L2Q5T890 1561 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 ETF1P62495 437 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 TMEM132EQ6IEE7 984 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 HOMER1Q86YM7 354 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 SUGP1Q8IWZ8 645 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 REXO1L1PQ8IX06 675 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 ANO10Q9NW15 660 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 STAG3Q9UJ98 1225 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 CYP46A1Q9Y6A2 500 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 CFAP65Q6ZU64 1925 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 NR1I2O75469 434 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 KRT24Q2M2I5 525 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 KIF20BQ96Q89 1820 aa6.82□□□□□ -1.32
R3HDM1-202ENST00000409478 LARGE1O95461 756 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 SFPQP23246 707 aaKnown RBP eCLIP6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CD163L1Q9NR16 1453 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 LMTK2Q8IWU2 1503 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 SMC2O95347 1197 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 HMOX1P09601 288 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 SWT1Q5T5J6 900 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CDC37L1Q7L3B6 337 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CEP57L1Q8IYX8 460 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 LRRN4CLQ8ND94 238 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 HECW2Q9P2P5 1572 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 SASH3O75995 380 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 SEC31AO94979 1220 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 GNAI3P08754 354 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CCDC172P0C7W6 258 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 UNC5CLQ8IV45 518 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 RASEFQ8IZ41 740 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CHMP4CQ96CF2 233 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 ZSWIM6Q9HCJ5 1215 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CEP83Q9Y592 693 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 ABCC3O15438 1527 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 ARHGEF10O15013 1369 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 EVCP57679 992 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 C11orf57Q6ZUT1 292 aaPredicted RBP6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 PACS2Q86VP3 889 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 DHX40Q8IX18 779 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 RUFY2Q8WXA3 655 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CFAP45Q9UL16 551 aa6.81□□□□□ -1.32
R3HDM1-202ENST00000409478 CAMSAP1Q5T5Y3 1602 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 MROH1Q8NDA8 1641 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 KIF3BO15066 747 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 KIF1CO43896 1103 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms