RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 KLRG2A4D1S0 409 aaPredicted RBP25.38■■□□□ 1.65
PDLIM2-207ENST00000409417 ERFEQ4G0M1 354 aa25.38■■□□□ 1.65
PDLIM2-207ENST00000409417 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
PDLIM2-207ENST00000409417 ADCY9O60503 1353 aa25.38■■□□□ 1.65
PDLIM2-207ENST00000409417 FKBP5Q13451 457 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-207ENST00000409417 GRIN3BO60391 1043 aa25.36■■□□□ 1.65
PDLIM2-207ENST00000409417 MYD88Q99836 296 aa25.36■■□□□ 1.65
PDLIM2-207ENST00000409417 TRMT112Q9UI30 125 aaKnown RBP25.36■■□□□ 1.65
PDLIM2-207ENST00000409417 ANKRD31Q8N7Z5 1873 aa25.36■■□□□ 1.65
PDLIM2-207ENST00000409417 DALRD3Q5D0E6 543 aaKnown RBP25.35■■□□□ 1.65
PDLIM2-207ENST00000409417 ABCC12Q96J65 1359 aa25.35■■□□□ 1.65
PDLIM2-207ENST00000409417 ANKRD36CQ5JPF3 1778 aa25.35■■□□□ 1.65
PDLIM2-207ENST00000409417 ARFGEF2Q9Y6D5 1785 aa25.35■■□□□ 1.65
PDLIM2-207ENST00000409417 SRGNP10124 158 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 BCS1LQ9Y276 419 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 RIC1Q4ADV7 1423 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 NEXNQ0ZGT2 675 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 ALDH1L2Q3SY69 923 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 SLC10A5Q5PT55 438 aa25.34■■□□□ 1.65
PDLIM2-207ENST00000409417 MRPL50Q8N5N7 158 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-207ENST00000409417 TTLL6Q8N841 843 aa25.33■■□□□ 1.65
PDLIM2-207ENST00000409417 CCDC191Q8NCU4 936 aa25.33■■□□□ 1.65
PDLIM2-207ENST00000409417 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
PDLIM2-207ENST00000409417 STYK1Q6J9G0 422 aa25.32■■□□□ 1.64
PDLIM2-207ENST00000409417 DNAAF4Q8WXU2 420 aa25.32■■□□□ 1.64
PDLIM2-207ENST00000409417 ZNF622Q969S3 477 aaKnown RBP eCLIP25.32■■□□□ 1.64
PDLIM2-207ENST00000409417 MASTLQ96GX5 879 aa25.32■■□□□ 1.64
PDLIM2-207ENST00000409417 BRCA1P38398 1863 aaKnown RBP25.3■■□□□ 1.64
PDLIM2-207ENST00000409417 IGKV5-2P06315 115 aa25.3■■□□□ 1.64
PDLIM2-207ENST00000409417 NPR1P16066 1061 aa25.3■■□□□ 1.64
PDLIM2-207ENST00000409417 SYNE4Q8N205 404 aa25.3■■□□□ 1.64
PDLIM2-207ENST00000409417 CWC25Q9NXE8 425 aaPredicted RBP25.3■■□□□ 1.64
PDLIM2-207ENST00000409417 CNKSR1Q969H4 720 aa25.29■■□□□ 1.64
PDLIM2-207ENST00000409417 FAM89AQ96GI7 184 aa25.29■■□□□ 1.64
PDLIM2-207ENST00000409417 NLRP3Q96P20 1036 aa25.29■■□□□ 1.64
PDLIM2-207ENST00000409417 ZBTB38Q8NAP3 1195 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-207ENST00000409417 BCL2L13Q9BXK5 485 aa25.28■■□□□ 1.64
PDLIM2-207ENST00000409417 SMC4Q9NTJ3 1288 aa25.28■■□□□ 1.64
PDLIM2-207ENST00000409417 DLEC1Q9Y238 1755 aa25.28■■□□□ 1.64
PDLIM2-207ENST00000409417 HCLS1P14317 486 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-207ENST00000409417 NEURL1BA8MQ27 555 aa25.27■■□□□ 1.64
PDLIM2-207ENST00000409417 F6X3S4 739 aa25.27■■□□□ 1.64
PDLIM2-207ENST00000409417 PCCAP05165 728 aaPredicted RBP25.27■■□□□ 1.64
PDLIM2-207ENST00000409417 CWF19L2Q2TBE0 894 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-207ENST00000409417 C3orf67Q6ZVT6 689 aa25.27■■□□□ 1.64
PDLIM2-207ENST00000409417 LINS1Q8NG48 757 aa25.27■■□□□ 1.64
PDLIM2-207ENST00000409417 COL11A2P13942 1736 aaPredicted RBP25.26■■□□□ 1.63
PDLIM2-207ENST00000409417 PTPRCP08575 1304 aa25.26■■□□□ 1.63
PDLIM2-207ENST00000409417 RARSP54136 660 aaKnown RBP25.26■■□□□ 1.63
PDLIM2-207ENST00000409417 TNRC6CQ9HCJ0 1690 aaKnown RBP25.25■■□□□ 1.63
PDLIM2-207ENST00000409417 HOXA10P31260 410 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-207ENST00000409417 BRPF1P55201 1214 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-207ENST00000409417 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-207ENST00000409417 RPGRQ92834 1020 aaKnown RBP25.25■■□□□ 1.63
PDLIM2-207ENST00000409417 HSP90B1P14625 803 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-207ENST00000409417 ALDH1B1P30837 517 aa25.24■■□□□ 1.63
PDLIM2-207ENST00000409417 PRPF40BQ6NWY9 871 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-207ENST00000409417 IRS4O14654 1257 aaPredicted RBP25.23■■□□□ 1.63
PDLIM2-207ENST00000409417 BEND3Q5T5X7 828 aa25.23■■□□□ 1.63
PDLIM2-207ENST00000409417 GCKRQ14397 625 aa25.22■■□□□ 1.63
PDLIM2-207ENST00000409417 ARHGAP27Q6ZUM4 889 aa25.21■■□□□ 1.63
PDLIM2-207ENST00000409417 RBM17Q96I25 401 aaKnown RBP25.21■■□□□ 1.63
PDLIM2-207ENST00000409417 ARFGEF1Q9Y6D6 1849 aa25.21■■□□□ 1.63
PDLIM2-207ENST00000409417 CRAMP1Q96RY5 1269 aa25.21■■□□□ 1.63
PDLIM2-207ENST00000409417 SLC4A10Q6U841 1118 aa25.2■■□□□ 1.62
PDLIM2-207ENST00000409417 JARID2Q92833 1246 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-207ENST00000409417 CDHR2Q9BYE9 1310 aa25.19■■□□□ 1.62
PDLIM2-207ENST00000409417 H7C1W4 665 aa25.19■■□□□ 1.62
PDLIM2-207ENST00000409417 C21orf2O43822 256 aa25.19■■□□□ 1.62
PDLIM2-207ENST00000409417 SF3B3Q15393 1217 aaKnown RBP25.19■■□□□ 1.62
PDLIM2-207ENST00000409417 C7orf43Q8WVR3 580 aa25.19■■□□□ 1.62
PDLIM2-207ENST00000409417 UBE3BQ7Z3V4 1068 aa25.18■■□□□ 1.62
PDLIM2-207ENST00000409417 NOB1Q9ULX3 412 aaKnown RBP25.18■■□□□ 1.62
PDLIM2-207ENST00000409417 ALDH1L1O75891 902 aa25.17■■□□□ 1.62
PDLIM2-207ENST00000409417 SOGA3Q5TF21 947 aa25.17■■□□□ 1.62
PDLIM2-207ENST00000409417 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
PDLIM2-207ENST00000409417 SLX4Q8IY92 1834 aa25.17■■□□□ 1.62
PDLIM2-207ENST00000409417 ZNF219Q9P2Y4 722 aaPredicted RBP25.16■■□□□ 1.62
PDLIM2-207ENST00000409417 KIF16BQ96L93 1317 aa25.16■■□□□ 1.62
PDLIM2-207ENST00000409417 PDE8AO60658 829 aa25.15■■□□□ 1.62
PDLIM2-207ENST00000409417 DDX46Q7L014 1031 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-207ENST00000409417 DDX60Q8IY21 1712 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-207ENST00000409417 ARHGAP45Q92619 1136 aa25.15■■□□□ 1.62
PDLIM2-207ENST00000409417 ABCC4O15439 1325 aa25.14■■□□□ 1.62
PDLIM2-207ENST00000409417 CASP7P55210 303 aa25.14■■□□□ 1.61
PDLIM2-207ENST00000409417 API5Q9BZZ5 524 aaKnown RBP25.14■■□□□ 1.61
PDLIM2-207ENST00000409417 BCAR3O75815 825 aa25.13■■□□□ 1.61
PDLIM2-207ENST00000409417 BBOX1O75936 387 aa25.13■■□□□ 1.61
PDLIM2-207ENST00000409417 YY1P25490 414 aa25.13■■□□□ 1.61
PDLIM2-207ENST00000409417 CHD4Q14839 1912 aa25.13■■□□□ 1.61
PDLIM2-207ENST00000409417 PLA2G12BQ9BX93 195 aa25.13■■□□□ 1.61
PDLIM2-207ENST00000409417 GRM8O00222 908 aa25.12■■□□□ 1.61
PDLIM2-207ENST00000409417 GRAPQ13588 217 aa25.12■■□□□ 1.61
PDLIM2-207ENST00000409417 CCDC152Q4G0S7 254 aa25.12■■□□□ 1.61
PDLIM2-207ENST00000409417 GRAPLQ8TC17 118 aaPredicted RBP25.12■■□□□ 1.61
PDLIM2-207ENST00000409417 LAMB2P55268 1798 aa25.12■■□□□ 1.61
PDLIM2-207ENST00000409417 NFKBIEO00221 500 aa25.11■■□□□ 1.61
PDLIM2-207ENST00000409417 PPEF1O14829 653 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms