RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
NIF3L1-204ENST00000409357 KDM4AO75164 1064 aa12.76□□□□□ -0.37
NIF3L1-204ENST00000409357 MMP14P50281 582 aa12.76□□□□□ -0.37
NIF3L1-204ENST00000409357 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
NIF3L1-204ENST00000409357 UTRNP46939 3433 aa12.76□□□□□ -0.37
NIF3L1-204ENST00000409357 LRP5O75197 1615 aa12.75□□□□□ -0.37
NIF3L1-204ENST00000409357 KIF18AQ8NI77 898 aa12.75□□□□□ -0.37
NIF3L1-204ENST00000409357 TSC1Q92574 1164 aa12.75□□□□□ -0.37
NIF3L1-204ENST00000409357 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-204ENST00000409357 NSD2O96028 1365 aa12.75□□□□□ -0.37
NIF3L1-204ENST00000409357 RAD50Q92878 1312 aa12.75□□□□□ -0.37
NIF3L1-204ENST00000409357 PLSCR1O15162 318 aa12.74□□□□□ -0.37
NIF3L1-204ENST00000409357 ADCY5O95622 1261 aa12.74□□□□□ -0.37
NIF3L1-204ENST00000409357 CUL4AQ13619 759 aa12.74□□□□□ -0.37
NIF3L1-204ENST00000409357 CTR9Q6PD62 1173 aa12.74□□□□□ -0.37
NIF3L1-204ENST00000409357 ZCRB1Q8TBF4 217 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-204ENST00000409357 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
NIF3L1-204ENST00000409357 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 RGS22Q8NE09 1264 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 EYA1Q99502 592 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 GEMIN8Q9NWZ8 242 aaKnown RBP12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 CCDC183Q5T5S1 534 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 ITPRIPQ8IWB1 547 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
NIF3L1-204ENST00000409357 VGLL3A8MV65 326 aa12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 INTS3Q68E01 1043 aaKnown RBP12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 ZNF397Q8NF99 534 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 ITGB4P16144 1822 aa12.72□□□□□ -0.37
NIF3L1-204ENST00000409357 CYP27B1O15528 508 aa12.71□□□□□ -0.37
NIF3L1-204ENST00000409357 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
NIF3L1-204ENST00000409357 RNF214Q8ND24 703 aa12.71□□□□□ -0.37
NIF3L1-204ENST00000409357 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-204ENST00000409357 LY75O60449 1722 aa12.71□□□□□ -0.37
NIF3L1-204ENST00000409357 REC8O95072 547 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 CAPN2P17655 700 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 MX1P20591 662 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 PKP1Q13835 747 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 MUM1L1Q5H9M0 696 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 CYP2C19P33261 490 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
NIF3L1-204ENST00000409357 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 KCNQ4P56696 695 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
NIF3L1-204ENST00000409357 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
NIF3L1-204ENST00000409357 ANKRD45Q5TZF3 282 aa12.68□□□□□ -0.38
NIF3L1-204ENST00000409357 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
NIF3L1-204ENST00000409357 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
NIF3L1-204ENST00000409357 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
NIF3L1-204ENST00000409357 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 KCNF1Q9H3M0 494 aa12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 FEZ2Q9UHY8 353 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 ANAPC15P60006 121 aa12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 TTC22Q5TAA0 569 aa12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 ZGPATQ8N5A5 531 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
NIF3L1-204ENST00000409357 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 ZNF827Q17R98 1081 aa12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 PLEKHM2Q8IWE5 1019 aa12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 PYCARDQ9ULZ3 195 aa12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-204ENST00000409357 MTHFSP49914 203 aa12.65□□□□□ -0.38
NIF3L1-204ENST00000409357 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.38
NIF3L1-204ENST00000409357 CCDC112Q8NEF3 446 aa12.65□□□□□ -0.38
NIF3L1-204ENST00000409357 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
NIF3L1-204ENST00000409357 IGSF3O75054 1194 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 DSG3P32926 999 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 IL13P35225 146 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 UBE2HP62256 183 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 C5P01031 1676 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 TAF1LQ8IZX4 1826 aa12.64□□□□□ -0.39
NIF3L1-204ENST00000409357 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms