RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
LIMS2-203ENST00000409254 GRM8O00222 908 aa16.42■□□□□ 0.22
LIMS2-203ENST00000409254 PLIN1O60240 522 aa16.42■□□□□ 0.22
LIMS2-203ENST00000409254 PCCAP05165 728 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-203ENST00000409254 TM4SF1P30408 202 aa16.42■□□□□ 0.22
LIMS2-203ENST00000409254 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
LIMS2-203ENST00000409254 CLUAP1Q96AJ1 413 aa16.42■□□□□ 0.22
LIMS2-203ENST00000409254 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
LIMS2-203ENST00000409254 FKBP8Q14318 412 aa16.41■□□□□ 0.22
LIMS2-203ENST00000409254 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
LIMS2-203ENST00000409254 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
LIMS2-203ENST00000409254 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-203ENST00000409254 NTSR2O95665 410 aa16.4■□□□□ 0.22
LIMS2-203ENST00000409254 NEFLP07196 543 aa16.4■□□□□ 0.22
LIMS2-203ENST00000409254 NFIXQ14938 502 aa16.4■□□□□ 0.22
LIMS2-203ENST00000409254 PANK1Q8TE04 598 aa16.4■□□□□ 0.22
LIMS2-203ENST00000409254 LRP5O75197 1615 aa16.4■□□□□ 0.22
LIMS2-203ENST00000409254 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
LIMS2-203ENST00000409254 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
LIMS2-203ENST00000409254 POLRMTO00411 1230 aaKnown RBP16.39■□□□□ 0.21
LIMS2-203ENST00000409254 MSH5O43196 834 aa16.39■□□□□ 0.21
LIMS2-203ENST00000409254 R3HDM1Q15032 1099 aaKnown RBP16.39■□□□□ 0.21
LIMS2-203ENST00000409254 CWF19L2Q2TBE0 894 aaKnown RBP16.39■□□□□ 0.21
LIMS2-203ENST00000409254 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
LIMS2-203ENST00000409254 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
LIMS2-203ENST00000409254 PLA2G12BQ9BX93 195 aa16.39■□□□□ 0.21
LIMS2-203ENST00000409254 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.21
LIMS2-203ENST00000409254 H7C1W4 665 aa16.38■□□□□ 0.21
LIMS2-203ENST00000409254 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-203ENST00000409254 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
LIMS2-203ENST00000409254 USP44Q9H0E7 712 aa16.38■□□□□ 0.21
LIMS2-203ENST00000409254 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-203ENST00000409254 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
LIMS2-203ENST00000409254 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
LIMS2-203ENST00000409254 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-203ENST00000409254 GPTP24298 496 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 CASP7P55210 303 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 SMIM5Q71RC9 77 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-203ENST00000409254 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 RTL9Q8NET4 1388 aa16.37■□□□□ 0.21
LIMS2-203ENST00000409254 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
LIMS2-203ENST00000409254 MMP10P09238 476 aa16.36■□□□□ 0.21
LIMS2-203ENST00000409254 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
LIMS2-203ENST00000409254 TRMT112Q9UI30 125 aaKnown RBP16.36■□□□□ 0.21
LIMS2-203ENST00000409254 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-203ENST00000409254 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
LIMS2-203ENST00000409254 SERPINB2P05120 415 aa16.35■□□□□ 0.21
LIMS2-203ENST00000409254 POLD1P28340 1107 aa16.35■□□□□ 0.21
LIMS2-203ENST00000409254 ST5P78524 1137 aa16.35■□□□□ 0.21
LIMS2-203ENST00000409254 DDR1Q08345 913 aa16.35■□□□□ 0.21
LIMS2-203ENST00000409254 SUSD4Q5VX71 490 aa16.35■□□□□ 0.21
LIMS2-203ENST00000409254 GNAI2P04899 355 aa16.34■□□□□ 0.21
LIMS2-203ENST00000409254 MTX1Q13505 466 aa16.34■□□□□ 0.21
LIMS2-203ENST00000409254 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
LIMS2-203ENST00000409254 MEIS3Q99687 375 aa16.34■□□□□ 0.21
LIMS2-203ENST00000409254 PDE8AO60658 829 aa16.33■□□□□ 0.2
LIMS2-203ENST00000409254 RABL6Q3YEC7 729 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-203ENST00000409254 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
LIMS2-203ENST00000409254 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
LIMS2-203ENST00000409254 A0A1B0GUL6 1792 aa16.33■□□□□ 0.2
LIMS2-203ENST00000409254 SPEF2Q9C093 1822 aa16.33■□□□□ 0.2
LIMS2-203ENST00000409254 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-203ENST00000409254 LRRC37AA6NMS7 1700 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 IRS4O14654 1257 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-203ENST00000409254 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-203ENST00000409254 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 PRR5LQ6MZQ0 368 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-203ENST00000409254 SPON1Q9HCB6 807 aa16.32■□□□□ 0.2
LIMS2-203ENST00000409254 GTF2E1P29083 439 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-203ENST00000409254 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
LIMS2-203ENST00000409254 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
LIMS2-203ENST00000409254 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
LIMS2-203ENST00000409254 NPHP1O15259 732 aa16.3■□□□□ 0.2
LIMS2-203ENST00000409254 CTSWP56202 376 aa16.3■□□□□ 0.2
LIMS2-203ENST00000409254 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
LIMS2-203ENST00000409254 RPAP2Q8IXW5 612 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-203ENST00000409254 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-203ENST00000409254 CSF1RP07333 972 aa16.29■□□□□ 0.2
LIMS2-203ENST00000409254 PDE6BP35913 854 aa16.29■□□□□ 0.2
LIMS2-203ENST00000409254 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
LIMS2-203ENST00000409254 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
LIMS2-203ENST00000409254 HMMRO75330 724 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 ZBTB7AO95365 584 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 PTGER2P43116 358 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 FOXO4P98177 505 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
LIMS2-203ENST00000409254 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms