RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 ANO6Q4KMQ2 910 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 DYDC1Q8WWB3 177 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 GOLGA8AA7E2F4 631 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
PBRM1-205ENST00000409057 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
PBRM1-205ENST00000409057 TSG101Q99816 390 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
PBRM1-205ENST00000409057 PLCH2O75038 1416 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.43
PBRM1-205ENST00000409057 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.43
PBRM1-205ENST00000409057 NAA15Q9BXJ9 866 aaKnown RBP12.33□□□□□ -0.43
PBRM1-205ENST00000409057 RLBP1P12271 317 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
PBRM1-205ENST00000409057 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
PBRM1-205ENST00000409057 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
PBRM1-205ENST00000409057 ARFGAP3Q9NP61 516 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 DUOX2Q9NRD8 1548 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
PBRM1-205ENST00000409057 IFFO1Q0D2I5 559 aa12.33□□□□□ -0.44
PBRM1-205ENST00000409057 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 F13A1P00488 732 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 IQCA1Q86XH1 822 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 ZSCAN29Q8IWY8 852 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 DACT1Q9NYF0 836 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 SLC5A1P13866 664 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 RBM5P52756 815 aaKnown RBP eCLIP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 RNF187Q5TA31 235 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 ALS2CR12Q96Q35 445 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 POLKQ9UBT6 870 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 CETN2P41208 172 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 UBASH3AP57075 661 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 CCDC94Q9BW85 323 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
PBRM1-205ENST00000409057 RAB34Q9BZG1 259 aa12.32□□□□□ -0.44
PBRM1-205ENST00000409057 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 SLU7O95391 586 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 TCOF1Q13428 1488 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 USP5P45974 858 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 TDRD12Q587J7 1177 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 BRF1Q92994 677 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 MKNK2Q9HBH9 465 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 DNAI1Q9UI46 699 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 KIF20AO95235 890 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 GPTP24298 496 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
PBRM1-205ENST00000409057 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
PBRM1-205ENST00000409057 SYKP43405 635 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 CCDC178Q5BJE1 867 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
PBRM1-205ENST00000409057 VAMP4O75379 141 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 MTIF2P46199 727 aaKnown RBP12.3□□□□□ -0.44
PBRM1-205ENST00000409057 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 SNRPA1P09661 255 aaKnown RBP12.3□□□□□ -0.44
PBRM1-205ENST00000409057 ZNF76P36508 570 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
PBRM1-205ENST00000409057 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
PBRM1-205ENST00000409057 CHPF2Q9P2E5 772 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 SEC24BO95487 1268 aa12.3□□□□□ -0.44
PBRM1-205ENST00000409057 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.444e-6■■■■□ 22.5
PBRM1-205ENST00000409057 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
PBRM1-205ENST00000409057 HAND2P61296 217 aa12.29□□□□□ -0.44
PBRM1-205ENST00000409057 SMC1AQ14683 1233 aaKnown RBP12.29□□□□□ -0.44
PBRM1-205ENST00000409057 WWC2Q6AWC2 1192 aa12.29□□□□□ -0.44
PBRM1-205ENST00000409057 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
PBRM1-205ENST00000409057 CCDC175P0C221 793 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms