RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 ZSCAN25Q6NSZ9 544 aa20.52■□□□□ 0.88
GAREM2-202ENST00000407684 G2E3Q7L622 706 aa20.52■□□□□ 0.88
GAREM2-202ENST00000407684 KDM4AO75164 1064 aa20.52■□□□□ 0.87
GAREM2-202ENST00000407684 NACAP1Q9BZK3 213 aa20.52■□□□□ 0.87
GAREM2-202ENST00000407684 CPS1P31327 1500 aa20.51■□□□□ 0.87
GAREM2-202ENST00000407684 MNS1Q8NEH6 495 aa20.51■□□□□ 0.87
GAREM2-202ENST00000407684 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
GAREM2-202ENST00000407684 RBM10P98175 930 aaKnown RBP20.51■□□□□ 0.87
GAREM2-202ENST00000407684 NUCB1Q02818 461 aa20.51■□□□□ 0.87
GAREM2-202ENST00000407684 MTERF4Q7Z6M4 381 aaKnown RBP20.51■□□□□ 0.87
GAREM2-202ENST00000407684 ARHGEF28Q8N1W1 1705 aaKnown RBP20.51■□□□□ 0.87
GAREM2-202ENST00000407684 ZNF396Q96N95 335 aaPredicted RBP20.51■□□□□ 0.87
GAREM2-202ENST00000407684 NCOA3Q9Y6Q9 1424 aa20.5■□□□□ 0.87
GAREM2-202ENST00000407684 ZBTB7BO15156 539 aaPredicted RBP20.5■□□□□ 0.87
GAREM2-202ENST00000407684 STK3Q13188 491 aa20.5■□□□□ 0.87
GAREM2-202ENST00000407684 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
GAREM2-202ENST00000407684 USP21Q9UK80 565 aa20.49■□□□□ 0.87
GAREM2-202ENST00000407684 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
GAREM2-202ENST00000407684 CWC27Q6UX04 472 aaKnown RBP20.49■□□□□ 0.87
GAREM2-202ENST00000407684 ARGLU1Q9NWB6 273 aaPredicted RBP20.49■□□□□ 0.87
GAREM2-202ENST00000407684 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
GAREM2-202ENST00000407684 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
GAREM2-202ENST00000407684 OVOS2A0A0J9YW53 1432 aa20.49■□□□□ 0.87
GAREM2-202ENST00000407684 OVOS2Q6IE36 1432 aa20.49■□□□□ 0.87
GAREM2-202ENST00000407684 CEBPZQ03701 1054 aaKnown RBP20.49■□□□□ 0.87
GAREM2-202ENST00000407684 MYO3AQ8NEV4 1616 aa20.48■□□□□ 0.87
GAREM2-202ENST00000407684 ZNF853P0CG23 659 aa20.48■□□□□ 0.87
GAREM2-202ENST00000407684 USP19O94966 1318 aa20.48■□□□□ 0.87
GAREM2-202ENST00000407684 STK38Q15208 465 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 ATP2B1P20020 1258 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
GAREM2-202ENST00000407684 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 BLOC1S2Q6QNY1 142 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 XRCC6P12956 609 aaKnown RBP eCLIP20.47■□□□□ 0.87
GAREM2-202ENST00000407684 KAT6BQ8WYB5 2073 aa20.47■□□□□ 0.87
GAREM2-202ENST00000407684 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
GAREM2-202ENST00000407684 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
GAREM2-202ENST00000407684 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
GAREM2-202ENST00000407684 GIGYF1O75420 1035 aaPredicted RBP20.46■□□□□ 0.87
GAREM2-202ENST00000407684 KRT85P78386 507 aa20.46■□□□□ 0.87
GAREM2-202ENST00000407684 CTNNA3Q9UI47 895 aa20.46■□□□□ 0.87
GAREM2-202ENST00000407684 PLBD2Q8NHP8 589 aa20.46■□□□□ 0.87
GAREM2-202ENST00000407684 RFC4P35249 363 aa20.46■□□□□ 0.87
GAREM2-202ENST00000407684 KRT32Q14532 448 aa20.46■□□□□ 0.87
GAREM2-202ENST00000407684 JAKMIP1Q96N16 626 aaKnown RBP20.46■□□□□ 0.87
GAREM2-202ENST00000407684 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.87
GAREM2-202ENST00000407684 JMYQ8N9B5 988 aa20.45■□□□□ 0.87
GAREM2-202ENST00000407684 RHPN1Q8TCX5 695 aa20.45■□□□□ 0.87
GAREM2-202ENST00000407684 ZSCAN31Q96LW9 406 aaPredicted RBP20.45■□□□□ 0.87
GAREM2-202ENST00000407684 PDRG1Q9NUG6 133 aa20.45■□□□□ 0.87
GAREM2-202ENST00000407684 MTMR7Q9Y216 660 aa20.45■□□□□ 0.87
GAREM2-202ENST00000407684 IFIT1P09914 478 aaKnown RBP20.45■□□□□ 0.86
GAREM2-202ENST00000407684 KLHL34Q8N239 644 aa20.45■□□□□ 0.86
GAREM2-202ENST00000407684 DCTPP1Q9H773 170 aa20.45■□□□□ 0.86
GAREM2-202ENST00000407684 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
GAREM2-202ENST00000407684 ECHDC1Q9NTX5 307 aa20.45■□□□□ 0.86
GAREM2-202ENST00000407684 CCDC192P0DO97 292 aa20.44■□□□□ 0.86
GAREM2-202ENST00000407684 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
GAREM2-202ENST00000407684 PDILTQ8N807 584 aa20.44■□□□□ 0.86
GAREM2-202ENST00000407684 TRIM22Q8IYM9 498 aa20.44■□□□□ 0.86
GAREM2-202ENST00000407684 CCDC8Q9H0W5 538 aaPredicted RBP20.44■□□□□ 0.86
GAREM2-202ENST00000407684 METTL22Q9BUU2 404 aaPredicted RBP20.44■□□□□ 0.86
GAREM2-202ENST00000407684 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
GAREM2-202ENST00000407684 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
GAREM2-202ENST00000407684 C3P01024 1663 aa20.43■□□□□ 0.86
GAREM2-202ENST00000407684 JARID2Q92833 1246 aaPredicted RBP20.43■□□□□ 0.86
GAREM2-202ENST00000407684 SMC2O95347 1197 aa20.43■□□□□ 0.86
GAREM2-202ENST00000407684 IKQ13123 557 aaPredicted RBP20.43■□□□□ 0.86
GAREM2-202ENST00000407684 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
GAREM2-202ENST00000407684 KCNQ3O43525 872 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 BRPF1P55201 1214 aaPredicted RBP20.42■□□□□ 0.86
GAREM2-202ENST00000407684 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 PDIA4P13667 645 aaKnown RBP20.42■□□□□ 0.86
GAREM2-202ENST00000407684 UBR1Q8IWV7 1749 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 DCCP43146 1447 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 ABCC4O15439 1325 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 LMBR1LQ6UX01 489 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 TNMDQ9H2S6 317 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 BOLA2Q9H3K6 86 aa20.42■□□□□ 0.86
GAREM2-202ENST00000407684 AXIN2Q9Y2T1 843 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 USP32Q8NFA0 1604 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 TXLNAP40222 546 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 C8orf34Q49A92 452 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 NCAPD2Q15021 1401 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 SLC5A1P13866 664 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 HSP90B2PQ58FF3 399 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
GAREM2-202ENST00000407684 KDM4FA0A1W2PPD8 638 aa20.4■□□□□ 0.86
GAREM2-202ENST00000407684 CCDC152Q4G0S7 254 aa20.4■□□□□ 0.86
GAREM2-202ENST00000407684 ME1P48163 572 aa20.4■□□□□ 0.86
GAREM2-202ENST00000407684 SPC24Q8NBT2 197 aa20.4■□□□□ 0.86
GAREM2-202ENST00000407684 RTCBQ9Y3I0 505 aaKnown RBP20.4■□□□□ 0.86
GAREM2-202ENST00000407684 MYO5BQ9ULV0 1848 aa20.39■□□□□ 0.86
GAREM2-202ENST00000407684 PANK2Q9BZ23 570 aa20.39■□□□□ 0.86
GAREM2-202ENST00000407684 NIP7Q9Y221 180 aaKnown RBP eCLIP20.39■□□□□ 0.86
GAREM2-202ENST00000407684 ITSN1Q15811 1721 aa20.39■□□□□ 0.86
GAREM2-202ENST00000407684 CCDC69A6NI79 296 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms