RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 USP27XA6NNY8 438 aa17.47■□□□□ 0.39
GGA1-206ENST00000406772 CHGBP05060 677 aa17.47■□□□□ 0.39
GGA1-206ENST00000406772 CCDC144BQ3MJ40 725 aa17.47■□□□□ 0.39
GGA1-206ENST00000406772 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
GGA1-206ENST00000406772 DNAJC2Q99543 621 aaKnown RBP17.47■□□□□ 0.39
GGA1-206ENST00000406772 SH2B1Q9NRF2 756 aaPredicted RBP17.47■□□□□ 0.39
GGA1-206ENST00000406772 ZNF75DP51815 510 aa17.47■□□□□ 0.39
GGA1-206ENST00000406772 G3BP1Q13283 466 aaKnown RBP eCLIP17.47■□□□□ 0.39
GGA1-206ENST00000406772 VPS53Q5VIR6 699 aa17.47■□□□□ 0.39
GGA1-206ENST00000406772 CEP135Q66GS9 1140 aa17.46■□□□□ 0.39
GGA1-206ENST00000406772 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
GGA1-206ENST00000406772 TLR7Q9NYK1 1049 aaKnown RBP17.46■□□□□ 0.39
GGA1-206ENST00000406772 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.39
GGA1-206ENST00000406772 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
GGA1-206ENST00000406772 ZRSR1Q15695 479 aaKnown RBP17.46■□□□□ 0.39
GGA1-206ENST00000406772 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 GTF2F1P35269 517 aaKnown RBP eCLIP17.45■□□□□ 0.38
GGA1-206ENST00000406772 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 BRF1Q92994 677 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
GGA1-206ENST00000406772 ISM2Q6H9L7 571 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
GGA1-206ENST00000406772 GTPBP4Q9BZE4 634 aaKnown RBP17.45■□□□□ 0.38
GGA1-206ENST00000406772 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
GGA1-206ENST00000406772 PDCP20941 246 aa17.44■□□□□ 0.38
GGA1-206ENST00000406772 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
GGA1-206ENST00000406772 SLC27A2O14975 620 aa17.44■□□□□ 0.38
GGA1-206ENST00000406772 SKILP12757 684 aa17.44■□□□□ 0.38
GGA1-206ENST00000406772 HSP90AB4PQ58FF6 505 aa17.44■□□□□ 0.38
GGA1-206ENST00000406772 ZNF215Q9UL58 517 aaPredicted RBP17.44■□□□□ 0.38
GGA1-206ENST00000406772 BIN1O00499 593 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
GGA1-206ENST00000406772 PTPN14Q15678 1187 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 PSMA5P28066 241 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 RNF20Q5VTR2 975 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 SCAND2PQ9GZW5 306 aaPredicted RBP17.43■□□□□ 0.38
GGA1-206ENST00000406772 ZSWIM6Q9HCJ5 1215 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 ANKRD26Q9UPS8 1709 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 ELF2Q15723 593 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 ST7Q9NRC1 585 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
GGA1-206ENST00000406772 CDC42BPGQ6DT37 1551 aa17.43■□□□□ 0.38
GGA1-206ENST00000406772 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 UTP14CQ5TAP6 766 aaKnown RBP17.42■□□□□ 0.38
GGA1-206ENST00000406772 C11orf57Q6ZUT1 292 aaPredicted RBP17.42■□□□□ 0.38
GGA1-206ENST00000406772 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
GGA1-206ENST00000406772 SMTNL1A8MU46 457 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 SMC2O95347 1197 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 ME1P48163 572 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 MYL6BP14649 208 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 CDK11BP21127 795 aaKnown RBP17.42■□□□□ 0.38
GGA1-206ENST00000406772 PROSER3Q2NL68 480 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 ZNF589Q86UQ0 364 aaPredicted RBP17.42■□□□□ 0.38
GGA1-206ENST00000406772 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 TMX1Q9H3N1 280 aa17.42■□□□□ 0.38
GGA1-206ENST00000406772 PGBD1Q96JS3 809 aa17.41■□□□□ 0.38
GGA1-206ENST00000406772 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
GGA1-206ENST00000406772 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
GGA1-206ENST00000406772 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
GGA1-206ENST00000406772 SEC62Q99442 399 aaKnown RBP17.41■□□□□ 0.38
GGA1-206ENST00000406772 DDX19AQ9NUU7 478 aaKnown RBP17.41■□□□□ 0.38
GGA1-206ENST00000406772 VGLL3A8MV65 326 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
GGA1-206ENST00000406772 CCDC69A6NI79 296 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 CCAR1Q8IX12 1150 aaKnown RBP17.4■□□□□ 0.38
GGA1-206ENST00000406772 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 SLFNL1Q499Z3 407 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 AOPEPQ8N6M6 819 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 CLSTN2Q9H4D0 955 aa17.4■□□□□ 0.38
GGA1-206ENST00000406772 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
GGA1-206ENST00000406772 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.37
GGA1-206ENST00000406772 ZNF530Q6P9A1 599 aaPredicted RBP17.39■□□□□ 0.37
GGA1-206ENST00000406772 ANKRD7Q92527 254 aa17.39■□□□□ 0.37
GGA1-206ENST00000406772 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
GGA1-206ENST00000406772 OGFRQ9NZT2 677 aa17.39■□□□□ 0.37
GGA1-206ENST00000406772 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
GGA1-206ENST00000406772 FLT4P35916 1363 aa17.39■□□□□ 0.37
GGA1-206ENST00000406772 BEND3Q5T5X7 828 aa17.39■□□□□ 0.37
GGA1-206ENST00000406772 Q6ZUG5 572 aa17.39■□□□□ 0.37
GGA1-206ENST00000406772 NCOA5Q9HCD5 579 aaKnown RBP17.39■□□□□ 0.37
GGA1-206ENST00000406772 AOX1Q06278 1338 aa17.39■□□□□ 0.37
GGA1-206ENST00000406772 HDGFP51858 240 aaKnown RBP17.38■□□□□ 0.37
GGA1-206ENST00000406772 POLA2Q14181 598 aa17.38■□□□□ 0.37
GGA1-206ENST00000406772 NECTIN1Q15223 517 aa17.38■□□□□ 0.37
GGA1-206ENST00000406772 BBXQ8WY36 941 aaPredicted RBP17.38■□□□□ 0.37
GGA1-206ENST00000406772 GTF3C6Q969F1 213 aa17.38■□□□□ 0.37
GGA1-206ENST00000406772 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
GGA1-206ENST00000406772 KIF20AO95235 890 aa17.37■□□□□ 0.37
GGA1-206ENST00000406772 CEBPAP49715 358 aaPredicted RBP17.37■□□□□ 0.37
GGA1-206ENST00000406772 OTUD7BQ6GQQ9 843 aa17.37■□□□□ 0.37
GGA1-206ENST00000406772 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
GGA1-206ENST00000406772 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms