RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 TSHZ3Q63HK5 1081 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 CABP4P57796 275 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
LSP1-204ENST00000406638 CNPY2Q9Y2B0 182 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
LSP1-204ENST00000406638 CEP85Q6P2H3 762 aa19.41■□□□□ 0.7
LSP1-204ENST00000406638 MX1P20591 662 aa19.41■□□□□ 0.7
LSP1-204ENST00000406638 ABCC6O95255 1503 aa19.41■□□□□ 0.7
LSP1-204ENST00000406638 MYL6BP14649 208 aa19.4■□□□□ 0.7
LSP1-204ENST00000406638 MCM2P49736 904 aa19.4■□□□□ 0.7
LSP1-204ENST00000406638 CTIFO43310 598 aaKnown RBP19.4■□□□□ 0.7
LSP1-204ENST00000406638 GIMAP6Q6P9H5 292 aa19.4■□□□□ 0.7
LSP1-204ENST00000406638 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
LSP1-204ENST00000406638 SIPA1L3O60292 1781 aaPredicted RBP19.4■□□□□ 0.7
LSP1-204ENST00000406638 TCHHQ07283 1943 aa19.4■□□□□ 0.7
LSP1-204ENST00000406638 ADAMTS7Q9UKP4 1686 aa19.4■□□□□ 0.7
LSP1-204ENST00000406638 PDIA6Q15084 440 aa19.39■□□□□ 0.7
LSP1-204ENST00000406638 INTS4Q96HW7 963 aaKnown RBP19.39■□□□□ 0.7
LSP1-204ENST00000406638 BCL11BQ9C0K0 894 aaPredicted RBP19.39■□□□□ 0.7
LSP1-204ENST00000406638 VGLL3A8MV65 326 aa19.39■□□□□ 0.69
LSP1-204ENST00000406638 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.69
LSP1-204ENST00000406638 CCT4P50991 539 aaKnown RBP19.38■□□□□ 0.69
LSP1-204ENST00000406638 FEZ1Q99689 392 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 OGFRQ9NZT2 677 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 ADCY9O60503 1353 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 NCBP1Q09161 790 aaKnown RBP19.38■□□□□ 0.69
LSP1-204ENST00000406638 NAA30Q147X3 362 aaPredicted RBP19.38■□□□□ 0.69
LSP1-204ENST00000406638 USP44Q9H0E7 712 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 PCDH11XQ9BZA7 1347 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 PCDH11YQ9BZA8 1340 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 WDR33Q9C0J8 1336 aaKnown RBP19.38■□□□□ 0.69
LSP1-204ENST00000406638 UBAP1LF5GYI3 381 aa19.38■□□□□ 0.69
LSP1-204ENST00000406638 RPAP2Q8IXW5 612 aaPredicted RBP19.38■□□□□ 0.69
LSP1-204ENST00000406638 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
LSP1-204ENST00000406638 HOXB7P09629 217 aa19.37■□□□□ 0.69
LSP1-204ENST00000406638 PDE1AP54750 535 aa19.37■□□□□ 0.69
LSP1-204ENST00000406638 DBF4Q9UBU7 674 aaPredicted RBP19.37■□□□□ 0.69
LSP1-204ENST00000406638 LRRFIP2Q9Y608 721 aaKnown RBP19.37■□□□□ 0.69
LSP1-204ENST00000406638 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
LSP1-204ENST00000406638 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
LSP1-204ENST00000406638 NBPF7P0C2Y1 421 aaPredicted RBP19.36■□□□□ 0.69
LSP1-204ENST00000406638 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
LSP1-204ENST00000406638 TTC5Q8N0Z6 440 aa19.36■□□□□ 0.69
LSP1-204ENST00000406638 ESYT1Q9BSJ8 1104 aa19.36■□□□□ 0.69
LSP1-204ENST00000406638 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
LSP1-204ENST00000406638 FIBPO43427 364 aa19.35■□□□□ 0.69
LSP1-204ENST00000406638 DTNBO60941 627 aa19.35■□□□□ 0.69
LSP1-204ENST00000406638 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
LSP1-204ENST00000406638 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
LSP1-204ENST00000406638 MCCP23508 829 aa19.35■□□□□ 0.69
LSP1-204ENST00000406638 TAF3Q5VWG9 929 aa19.35■□□□□ 0.69
LSP1-204ENST00000406638 DNAAF4Q8WXU2 420 aa19.35■□□□□ 0.69
LSP1-204ENST00000406638 PTGS1P23219 599 aa19.34■□□□□ 0.69
LSP1-204ENST00000406638 BEND3Q5T5X7 828 aa19.34■□□□□ 0.69
LSP1-204ENST00000406638 C16orf45Q96MC5 204 aaPredicted RBP19.34■□□□□ 0.69
LSP1-204ENST00000406638 LARP6Q9BRS8 491 aaKnown RBP19.34■□□□□ 0.69
LSP1-204ENST00000406638 CTNNA3Q9UI47 895 aa19.34■□□□□ 0.69
LSP1-204ENST00000406638 NAP1L2Q9ULW6 460 aaPredicted RBP19.34■□□□□ 0.69
LSP1-204ENST00000406638 C5P01031 1676 aa19.34■□□□□ 0.69
LSP1-204ENST00000406638 RILPL2Q969X0 211 aa19.33■□□□□ 0.69
LSP1-204ENST00000406638 TOM1O60784 492 aa19.33■□□□□ 0.68
LSP1-204ENST00000406638 UBE2HP62256 183 aa19.33■□□□□ 0.68
LSP1-204ENST00000406638 EXOC6BQ9Y2D4 811 aa19.33■□□□□ 0.68
LSP1-204ENST00000406638 PHLPP1O60346 1717 aa19.32■□□□□ 0.68
LSP1-204ENST00000406638 FUCA2Q9BTY2 467 aa19.32■□□□□ 0.68
LSP1-204ENST00000406638 GNAI2P04899 355 aa19.32■□□□□ 0.68
LSP1-204ENST00000406638 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
LSP1-204ENST00000406638 MRC1P22897 1456 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 SLFN14P0C7P3 912 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 TMEM87AQ8NBN3 555 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 SHANK3Q9BYB0 1731 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 FMNL2Q96PY5 1086 aa19.31■□□□□ 0.68
LSP1-204ENST00000406638 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
LSP1-204ENST00000406638 PARP4Q9UKK3 1724 aaKnown RBP19.3■□□□□ 0.68
LSP1-204ENST00000406638 RPAP1Q9BWH6 1393 aaPredicted RBP19.3■□□□□ 0.68
LSP1-204ENST00000406638 GOLGA6L6A8MZA4 724 aa19.3■□□□□ 0.68
LSP1-204ENST00000406638 SNRPA1P09661 255 aaKnown RBP19.3■□□□□ 0.68
LSP1-204ENST00000406638 LRMPQ12912 555 aa19.3■□□□□ 0.68
LSP1-204ENST00000406638 ASAP1Q9ULH1 1129 aa19.3■□□□□ 0.68
LSP1-204ENST00000406638 NKX1-1Q15270 411 aaPredicted RBP19.3■□□□□ 0.68
LSP1-204ENST00000406638 TPM3P06753 285 aa19.29■□□□□ 0.68
LSP1-204ENST00000406638 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
LSP1-204ENST00000406638 KCNJ4P48050 445 aa19.29■□□□□ 0.68
LSP1-204ENST00000406638 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
LSP1-204ENST00000406638 A1BGP04217 495 aa19.29■□□□□ 0.68
LSP1-204ENST00000406638 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
LSP1-204ENST00000406638 GABPB1Q06547 395 aaPredicted RBP19.29■□□□□ 0.68
LSP1-204ENST00000406638 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
LSP1-204ENST00000406638 DDX41Q9UJV9 622 aaKnown RBP19.29■□□□□ 0.68
LSP1-204ENST00000406638 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
LSP1-204ENST00000406638 NBPF26B4DH59 902 aa19.28■□□□□ 0.68
LSP1-204ENST00000406638 CHMLP26374 656 aa19.28■□□□□ 0.68
LSP1-204ENST00000406638 ANAPC15P60006 121 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms