RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 IGKV5-2P06315 115 aa16.33■□□□□ 0.21
PMS2-204ENST00000406569 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.21
PMS2-204ENST00000406569 GJB2P29033 226 aa16.33■□□□□ 0.21
PMS2-204ENST00000406569 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.21
PMS2-204ENST00000406569 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.21
PMS2-204ENST00000406569 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.21
PMS2-204ENST00000406569 BICC1Q9H694 974 aaKnown RBP16.33■□□□□ 0.21
PMS2-204ENST00000406569 PRAMEF22A3QJZ6 481 aa16.33■□□□□ 0.2
PMS2-204ENST00000406569 CPA1P15085 419 aa16.33■□□□□ 0.2
PMS2-204ENST00000406569 NMIQ13287 307 aaPredicted RBP16.33■□□□□ 0.2
PMS2-204ENST00000406569 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
PMS2-204ENST00000406569 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
PMS2-204ENST00000406569 ADAMTSL3P82987 1691 aa16.33■□□□□ 0.2
PMS2-204ENST00000406569 COL18A1P39060 1754 aa16.33■□□□□ 0.2
PMS2-204ENST00000406569 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
PMS2-204ENST00000406569 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
PMS2-204ENST00000406569 PSMA5P28066 241 aa16.32■□□□□ 0.2
PMS2-204ENST00000406569 HSP90AA2PQ14568 343 aaPredicted RBP16.32■□□□□ 0.2
PMS2-204ENST00000406569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
PMS2-204ENST00000406569 ERBB3P21860 1342 aa16.32■□□□□ 0.2
PMS2-204ENST00000406569 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 SLC27A2O14975 620 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 ME3Q16798 604 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 FOXD4L6Q3SYB3 417 aaPredicted RBP16.31■□□□□ 0.2
PMS2-204ENST00000406569 FOXD4L3Q6VB84 417 aaPredicted RBP16.31■□□□□ 0.2
PMS2-204ENST00000406569 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 AXIN2Q9Y2T1 843 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
PMS2-204ENST00000406569 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
PMS2-204ENST00000406569 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
PMS2-204ENST00000406569 ARFGEF2Q9Y6D5 1785 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
PMS2-204ENST00000406569 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 USPL1Q5W0Q7 1092 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
PMS2-204ENST00000406569 METTL22Q9BUU2 404 aaPredicted RBP16.3■□□□□ 0.2
PMS2-204ENST00000406569 SLC52A2Q9HAB3 445 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 COPRSQ9NQ92 184 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.2
PMS2-204ENST00000406569 HMG20BQ9P0W2 317 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
PMS2-204ENST00000406569 ELP1O95163 1332 aa16.29■□□□□ 0.2
PMS2-204ENST00000406569 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
PMS2-204ENST00000406569 GCKRQ14397 625 aa16.29■□□□□ 0.2
PMS2-204ENST00000406569 LRP10Q7Z4F1 713 aa16.29■□□□□ 0.2
PMS2-204ENST00000406569 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
PMS2-204ENST00000406569 A0A0D9SFI3 127 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 DNM1Q05193 864 aaKnown RBP16.28■□□□□ 0.2
PMS2-204ENST00000406569 RNF20Q5VTR2 975 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
PMS2-204ENST00000406569 TLR7Q9NYK1 1049 aaKnown RBP16.28■□□□□ 0.2
PMS2-204ENST00000406569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
PMS2-204ENST00000406569 GLI3P10071 1580 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 PARP4Q9UKK3 1724 aaKnown RBP16.28■□□□□ 0.2
PMS2-204ENST00000406569 C1orf167Q5SNV9 1468 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 FIBPO43427 364 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 ATP5JP18859 108 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 PDCP20941 246 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 RFX5P48382 616 aaPredicted RBP16.28■□□□□ 0.2
PMS2-204ENST00000406569 NEXNQ0ZGT2 675 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
PMS2-204ENST00000406569 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.19
PMS2-204ENST00000406569 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.19
PMS2-204ENST00000406569 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
PMS2-204ENST00000406569 PHKG2P15735 406 aa16.26■□□□□ 0.19
PMS2-204ENST00000406569 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
PMS2-204ENST00000406569 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
PMS2-204ENST00000406569 EPHA10Q5JZY3 1008 aa16.26■□□□□ 0.19
PMS2-204ENST00000406569 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
PMS2-204ENST00000406569 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
PMS2-204ENST00000406569 KDM4AO75164 1064 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 TAF5LO75529 589 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
PMS2-204ENST00000406569 KCNJ4P48050 445 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
PMS2-204ENST00000406569 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 USP25Q9UHP3 1055 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 MEGF6O75095 1541 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 ADCY5O95622 1261 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 TOB2Q14106 344 aaPredicted RBP16.25■□□□□ 0.19
PMS2-204ENST00000406569 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
PMS2-204ENST00000406569 SASS6Q6UVJ0 657 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
PMS2-204ENST00000406569 TMEM94Q12767 1356 aa16.24■□□□□ 0.19
PMS2-204ENST00000406569 KRT85P78386 507 aa16.24■□□□□ 0.19
PMS2-204ENST00000406569 KRT32Q14532 448 aa16.24■□□□□ 0.19
PMS2-204ENST00000406569 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
PMS2-204ENST00000406569 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
PMS2-204ENST00000406569 RAPGEF4Q8WZA2 1011 aa16.24■□□□□ 0.19
PMS2-204ENST00000406569 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
PMS2-204ENST00000406569 MYH15Q9Y2K3 1946 aa16.23■□□□□ 0.19
PMS2-204ENST00000406569 VPS37CA5D8V6 355 aaPredicted RBP16.23■□□□□ 0.19
PMS2-204ENST00000406569 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms