RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 ME3Q16798 604 aa22.08■■□□□ 1.13
EWSR1-207ENST00000406548 TPRNQ4KMQ1 711 aa22.08■■□□□ 1.13
EWSR1-207ENST00000406548 EAF2Q96CJ1 260 aaPredicted RBP22.08■■□□□ 1.13
EWSR1-207ENST00000406548 FAM227BQ96M60 508 aa22.08■■□□□ 1.13
EWSR1-207ENST00000406548 DDX21Q9NR30 783 aaKnown RBP eCLIP22.08■■□□□ 1.13
EWSR1-207ENST00000406548 USP25Q9UHP3 1055 aa22.08■■□□□ 1.13
EWSR1-207ENST00000406548 HCLS1P14317 486 aaPredicted RBP22.07■■□□□ 1.12
EWSR1-207ENST00000406548 DNM1Q05193 864 aaKnown RBP22.07■■□□□ 1.12
EWSR1-207ENST00000406548 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
EWSR1-207ENST00000406548 MAP4K1Q92918 833 aa22.07■■□□□ 1.12
EWSR1-207ENST00000406548 SNRKQ9NRH2 765 aa22.07■■□□□ 1.12
EWSR1-207ENST00000406548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.07■■□□□ 1.12
EWSR1-207ENST00000406548 KCNJ4P48050 445 aa22.07■■□□□ 1.12
EWSR1-207ENST00000406548 KIAA2012Q0VF49 1180 aa22.07■■□□□ 1.12
EWSR1-207ENST00000406548 CCDC8Q9H0W5 538 aaPredicted RBP22.06■■□□□ 1.12
EWSR1-207ENST00000406548 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
EWSR1-207ENST00000406548 NPHP4O75161 1426 aaPredicted RBP22.05■■□□□ 1.12
EWSR1-207ENST00000406548 VPS37CA5D8V6 355 aaPredicted RBP22.05■■□□□ 1.12
EWSR1-207ENST00000406548 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
EWSR1-207ENST00000406548 TLR7Q9NYK1 1049 aaKnown RBP22.05■■□□□ 1.12
EWSR1-207ENST00000406548 TPCN1Q9ULQ1 816 aa22.05■■□□□ 1.12
EWSR1-207ENST00000406548 MRC1P22897 1456 aa22.05■■□□□ 1.12
EWSR1-207ENST00000406548 SLC27A2O14975 620 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 PSMA5P28066 241 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 FUCA2Q9BTY2 467 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 C5P01031 1676 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 UQCRHLA0A096LP55 91 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 DTNBO60941 627 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 UQCRHP07919 91 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 PDIA6Q15084 440 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 NECAB1Q8N987 351 aa22.04■■□□□ 1.12
EWSR1-207ENST00000406548 ADCY5O95622 1261 aa22.03■■□□□ 1.12
EWSR1-207ENST00000406548 FSD1Q9BTV5 496 aa22.03■■□□□ 1.12
EWSR1-207ENST00000406548 PDCL3Q9H2J4 239 aa22.03■■□□□ 1.12
EWSR1-207ENST00000406548 MED23Q9ULK4 1368 aa22.03■■□□□ 1.12
EWSR1-207ENST00000406548 A0A0D9SFI3 127 aa22.03■■□□□ 1.12
EWSR1-207ENST00000406548 IGKV5-2P06315 115 aa22.03■■□□□ 1.12
EWSR1-207ENST00000406548 TRPM3Q9HCF6 1732 aaPredicted RBP22.02■■□□□ 1.12
EWSR1-207ENST00000406548 ORAI2Q96SN7 254 aa22.02■■□□□ 1.12
EWSR1-207ENST00000406548 SIL1Q9H173 461 aa22.02■■□□□ 1.12
EWSR1-207ENST00000406548 RNF20Q5VTR2 975 aa22.02■■□□□ 1.11
EWSR1-207ENST00000406548 GIMAP6Q6P9H5 292 aa22.02■■□□□ 1.11
EWSR1-207ENST00000406548 SASS6Q6UVJ0 657 aa22.02■■□□□ 1.11
EWSR1-207ENST00000406548 RIC3Q7Z5B4 369 aa22.02■■□□□ 1.11
EWSR1-207ENST00000406548 BOLA2Q9H3K6 86 aa22.02■■□□□ 1.11
EWSR1-207ENST00000406548 PDIA4P13667 645 aaKnown RBP22.01■■□□□ 1.11
EWSR1-207ENST00000406548 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
EWSR1-207ENST00000406548 AXIN2Q9Y2T1 843 aa22.01■■□□□ 1.11
EWSR1-207ENST00000406548 RGPD5Q99666 1765 aa22.01■■□□□ 1.11
EWSR1-207ENST00000406548 JCADQ9P266 1359 aa22.01■■□□□ 1.11
EWSR1-207ENST00000406548 LARP1BQ659C4 914 aaKnown RBP22■■□□□ 1.11
EWSR1-207ENST00000406548 LMOD2Q6P5Q4 547 aa22■■□□□ 1.11
EWSR1-207ENST00000406548 BLOC1S2Q6QNY1 142 aa22■■□□□ 1.11
EWSR1-207ENST00000406548 KDM4AO75164 1064 aa22■■□□□ 1.11
EWSR1-207ENST00000406548 ANKRD1Q15327 319 aa22■■□□□ 1.11
EWSR1-207ENST00000406548 SCN11AQ9UI33 1791 aa22■■□□□ 1.11
EWSR1-207ENST00000406548 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
EWSR1-207ENST00000406548 NEXNQ0ZGT2 675 aa21.99■■□□□ 1.11
EWSR1-207ENST00000406548 KRT85P78386 507 aa21.99■■□□□ 1.11
EWSR1-207ENST00000406548 COL9A3Q14050 684 aaPredicted RBP21.99■■□□□ 1.11
EWSR1-207ENST00000406548 ALDH8A1Q9H2A2 487 aaPredicted RBP21.99■■□□□ 1.11
EWSR1-207ENST00000406548 PDCP20941 246 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 RPS6KB1P23443 525 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 ZNF790Q6PG37 636 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 CDC37L1Q7L3B6 337 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 KLHDC4Q8TBB5 520 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 PIBF1Q8WXW3 757 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 MPNDQ8N594 471 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 HMG20BQ9P0W2 317 aa21.98■■□□□ 1.11
EWSR1-207ENST00000406548 RBM10P98175 930 aaKnown RBP21.97■■□□□ 1.11
EWSR1-207ENST00000406548 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
EWSR1-207ENST00000406548 GCKRQ14397 625 aa21.97■■□□□ 1.11
EWSR1-207ENST00000406548 ZNF830Q96NB3 372 aaPredicted RBP21.97■■□□□ 1.11
EWSR1-207ENST00000406548 ELP1O95163 1332 aa21.97■■□□□ 1.11
EWSR1-207ENST00000406548 ERBB3P21860 1342 aa21.97■■□□□ 1.11
EWSR1-207ENST00000406548 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
EWSR1-207ENST00000406548 MYL6BP14649 208 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 TTC6Q86TZ1 520 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 ZNF589Q86UQ0 364 aaPredicted RBP21.96■■□□□ 1.11
EWSR1-207ENST00000406548 TCEANC2Q96MN5 208 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 DYNC1I1O14576 645 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 EPHA10Q5JZY3 1008 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 XAGE3Q8WTP9 111 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 SLC52A2Q9HAB3 445 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 TAF6LQ9Y6J9 622 aa21.96■■□□□ 1.11
EWSR1-207ENST00000406548 TOB2Q14106 344 aaPredicted RBP21.95■■□□□ 1.1
EWSR1-207ENST00000406548 FERMT3Q86UX7 667 aa21.95■■□□□ 1.1
EWSR1-207ENST00000406548 MYD88Q99836 296 aa21.95■■□□□ 1.1
EWSR1-207ENST00000406548 METTL22Q9BUU2 404 aaPredicted RBP21.95■■□□□ 1.1
EWSR1-207ENST00000406548 CCDC192P0DO97 292 aa21.95■■□□□ 1.1
EWSR1-207ENST00000406548 TSGA10IPQ3SY00 556 aa21.95■■□□□ 1.1
EWSR1-207ENST00000406548 TTC12Q9H892 705 aaPredicted RBP21.95■■□□□ 1.1
EWSR1-207ENST00000406548 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
EWSR1-207ENST00000406548 COPS6Q7L5N1 327 aa21.94■■□□□ 1.1
EWSR1-207ENST00000406548 COPRSQ9NQ92 184 aa21.94■■□□□ 1.1
EWSR1-207ENST00000406548 FAM13BQ9NYF5 915 aa21.94■■□□□ 1.1
EWSR1-207ENST00000406548 KIF1AQ12756 1690 aa21.93■■□□□ 1.1
EWSR1-207ENST00000406548 AFDNP55196 1824 aaKnown RBP21.93■■□□□ 1.1
EWSR1-207ENST00000406548 TAF5LO75529 589 aa21.93■■□□□ 1.1
EWSR1-207ENST00000406548 MAP7D2Q96T17 732 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms