RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 HYPKQ9NX55 129 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
FAM49A-202ENST00000406434 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
FAM49A-202ENST00000406434 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
FAM49A-202ENST00000406434 UBN2Q6ZU65 1347 aa13.35□□□□□ -0.27
FAM49A-202ENST00000406434 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
FAM49A-202ENST00000406434 C21orf2O43822 256 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 NPR1P16066 1061 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 HSP90AB3PQ58FF7 597 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 CCDC30Q5VVM6 783 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
FAM49A-202ENST00000406434 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
FAM49A-202ENST00000406434 RASSF7Q02833 373 aa13.33□□□□□ -0.27
FAM49A-202ENST00000406434 PARP10Q53GL7 1025 aa13.33□□□□□ -0.27
FAM49A-202ENST00000406434 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.27
FAM49A-202ENST00000406434 PLBD2Q8NHP8 589 aa13.33□□□□□ -0.27
FAM49A-202ENST00000406434 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.27
FAM49A-202ENST00000406434 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.27
FAM49A-202ENST00000406434 ATP10DQ9P241 1426 aa13.33□□□□□ -0.28
FAM49A-202ENST00000406434 IL16Q14005 1332 aa13.33□□□□□ -0.28
FAM49A-202ENST00000406434 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
FAM49A-202ENST00000406434 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
FAM49A-202ENST00000406434 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 RNF181Q9P0P0 153 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 TRMT112Q9UI30 125 aaKnown RBP13.32□□□□□ -0.28
FAM49A-202ENST00000406434 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
FAM49A-202ENST00000406434 NTSR2O95665 410 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 NLRP10Q86W26 655 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 MIER1Q8N108 512 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
FAM49A-202ENST00000406434 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
FAM49A-202ENST00000406434 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
FAM49A-202ENST00000406434 ABCC12Q96J65 1359 aa13.31□□□□□ -0.28
FAM49A-202ENST00000406434 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
FAM49A-202ENST00000406434 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
FAM49A-202ENST00000406434 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
FAM49A-202ENST00000406434 SYNE4Q8N205 404 aa13.31□□□□□ -0.28
FAM49A-202ENST00000406434 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
FAM49A-202ENST00000406434 SLX4Q8IY92 1834 aa13.31□□□□□ -0.28
FAM49A-202ENST00000406434 CACNA1SQ13698 1873 aa13.3□□□□□ -0.28
FAM49A-202ENST00000406434 FANCIQ9NVI1 1328 aa13.3□□□□□ -0.28
FAM49A-202ENST00000406434 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
FAM49A-202ENST00000406434 RTL5Q5HYW3 569 aaPredicted RBP13.3□□□□□ -0.28
FAM49A-202ENST00000406434 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
FAM49A-202ENST00000406434 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
FAM49A-202ENST00000406434 LMNB1P20700 586 aa13.29□□□□□ -0.28
FAM49A-202ENST00000406434 DIEXFQ68CQ4 756 aaKnown RBP13.29□□□□□ -0.28
FAM49A-202ENST00000406434 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
FAM49A-202ENST00000406434 MYD88Q99836 296 aa13.29□□□□□ -0.28
FAM49A-202ENST00000406434 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
FAM49A-202ENST00000406434 SBF1O95248 1867 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 NFKBIEO00221 500 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 FAM89AQ96GI7 184 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 SH3TC1Q8TE82 1336 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 ADCY9O60503 1353 aa13.28□□□□□ -0.28
FAM49A-202ENST00000406434 IBTKQ9P2D0 1353 aaPredicted RBP13.28□□□□□ -0.28
FAM49A-202ENST00000406434 VAMP4O75379 141 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 PRELPP51888 382 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 CRY2Q49AN0 593 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 CCDC93Q567U6 631 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 G2E3Q7L622 706 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.29
FAM49A-202ENST00000406434 PI4KAP2A4QPH2 592 aa13.26□□□□□ -0.29
FAM49A-202ENST00000406434 HOXA10P31260 410 aaPredicted RBP13.26□□□□□ -0.29
FAM49A-202ENST00000406434 PI4KAP1Q8N8J0 262 aa13.26□□□□□ -0.29
FAM49A-202ENST00000406434 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
FAM49A-202ENST00000406434 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
FAM49A-202ENST00000406434 TNRC6CQ9HCJ0 1690 aaKnown RBP13.26□□□□□ -0.29
FAM49A-202ENST00000406434 ANKRD36CQ5JPF3 1778 aa13.25□□□□□ -0.29
FAM49A-202ENST00000406434 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
FAM49A-202ENST00000406434 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
FAM49A-202ENST00000406434 CRAMP1Q96RY5 1269 aa13.25□□□□□ -0.29
FAM49A-202ENST00000406434 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
FAM49A-202ENST00000406434 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
FAM49A-202ENST00000406434 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
FAM49A-202ENST00000406434 DDX46Q7L014 1031 aaKnown RBP13.24□□□□□ -0.29
FAM49A-202ENST00000406434 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
FAM49A-202ENST00000406434 TMX4Q9H1E5 349 aaPredicted RBP13.24□□□□□ -0.29
FAM49A-202ENST00000406434 NMRK2Q9NPI5 230 aa13.24□□□□□ -0.29
FAM49A-202ENST00000406434 IRS4O14654 1257 aaPredicted RBP13.23□□□□□ -0.29
FAM49A-202ENST00000406434 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
FAM49A-202ENST00000406434 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
FAM49A-202ENST00000406434 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
FAM49A-202ENST00000406434 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
FAM49A-202ENST00000406434 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
FAM49A-202ENST00000406434 RRAGCQ9HB90 399 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms