RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 SYTL4Q96C24 671 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 RTL1A6NKG5 1358 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 KIAA0754O94854 1291 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 CTR9Q6PD62 1173 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 CACTINQ8WUQ7 758 aaKnown RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 LEO1Q8WVC0 666 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 ZBTB9Q96C00 473 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 UBASH3AP57075 661 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 IDI1Q13907 227 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 NAA30Q147X3 362 aaPredicted RBP8.59□□□□□ -1.04
HDAC9-202ENST00000405010 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 LARP1Q6PKG0 1096 aaKnown RBP8.59□□□□□ -1.04
HDAC9-202ENST00000405010 RUFY3Q7L099 469 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 CDC37L1Q7L3B6 337 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 RSPH14Q9UHP6 348 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 KIF24Q5T7B8 1368 aa8.59□□□□□ -1.04
HDAC9-202ENST00000405010 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
HDAC9-202ENST00000405010 NEK1Q96PY6 1258 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 CRACR2AQ9BSW2 395 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 DACH1Q9UI36 760 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 PNMA6EA0A0J9YXQ4 647 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 GNAT3A8MTJ3 354 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 CREB3L3Q68CJ9 461 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 NEK11Q8NG66 645 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 DNAAF4Q8WXU2 420 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
HDAC9-202ENST00000405010 C8orf76Q96K31 380 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 CARD6Q9BX69 1037 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 CTNNA3Q9UI47 895 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 MRVI1Q9Y6F6 885 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
HDAC9-202ENST00000405010 LRRC8AQ8IWT6 810 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 IPO4Q8TEX9 1081 aaKnown RBP8.57□□□□□ -1.04
HDAC9-202ENST00000405010 LRRC2Q9BYS8 371 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 SSH2Q76I76 1423 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 LRRIQ1Q96JM4 1722 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 VPS18Q9P253 973 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 ZFYVE9O95405 1425 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 RIMS2Q9UQ26 1411 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-202ENST00000405010 ZSCAN26Q16670 478 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 TTC31Q49AM3 519 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-202ENST00000405010 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-202ENST00000405010 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
HDAC9-202ENST00000405010 A0A0G2JS52 829 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 ZBTB22O15209 634 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 GOLGA1Q92805 767 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC9-202ENST00000405010 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-202ENST00000405010 OAS2P29728 719 aaKnown RBP8.56□□□□□ -1.04
HDAC9-202ENST00000405010 FBXO38Q6PIJ6 1188 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 CPLX3Q8WVH0 158 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 FAM107BQ9H098 131 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 ABCC10Q5T3U5 1492 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 ARHGEF5Q12774 1597 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 PLCH2O75038 1416 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 PI4KAP2A4QPH2 592 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 NR1I2O75469 434 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
HDAC9-202ENST00000405010 PI4KAP1Q8N8J0 262 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 UTP14AQ9BVJ6 771 aaKnown RBP8.56□□□□□ -1.04
HDAC9-202ENST00000405010 CHL1O00533 1208 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 PHACTR2O75167 634 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 MNAT1P51948 309 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 ME3Q16798 604 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 HSP90AA4PQ58FG1 418 aa8.56□□□□□ -1.04
HDAC9-202ENST00000405010 TDRD7Q8NHU6 1098 aaKnown RBP8.56□□□□□ -1.04
HDAC9-202ENST00000405010 PIK3R4Q99570 1358 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 PLXNC1O60486 1568 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 NMIQ13287 307 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-202ENST00000405010 MAP9Q49MG5 647 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 ANKRD7Q92527 254 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 MRFAP1L1Q96HT8 127 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 AOX1Q06278 1338 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 AK9Q5TCS8 1911 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 IL13P35225 146 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 FAM160A1Q05DH4 1040 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 HSP90AB2PQ58FF8 381 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 Q6ZUG5 572 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 TTC41PQ6P2S7 1318 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 FAM135BQ49AJ0 1406 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 CDR1P51861 262 aa8.55□□□□□ -1.04
HDAC9-202ENST00000405010 SMC1AQ14683 1233 aaKnown RBP8.55□□□□□ -1.04
HDAC9-202ENST00000405010 A0A1B0GUL7 405 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 WASLO00401 505 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 HNRNPH2P55795 449 aaKnown RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 EIF4A2Q14240 407 aaKnown RBP8.54□□□□□ -1.04
HDAC9-202ENST00000405010 HSP90AB3PQ58FF7 597 aa8.54□□□□□ -1.04
HDAC9-202ENST00000405010 KLHL10Q6JEL2 608 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms