RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 UTP14AQ9BVJ6 771 aaKnown RBP18.66■□□□□ 0.58
CDPF1-203ENST00000404583 MAP3K2Q9Y2U5 619 aa18.66■□□□□ 0.58
CDPF1-203ENST00000404583 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
CDPF1-203ENST00000404583 ADCY9O60503 1353 aa18.65■□□□□ 0.58
CDPF1-203ENST00000404583 H0YIN7 160 aa18.65■□□□□ 0.58
CDPF1-203ENST00000404583 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
CDPF1-203ENST00000404583 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
CDPF1-203ENST00000404583 ABCC12Q96J65 1359 aa18.64■□□□□ 0.57
CDPF1-203ENST00000404583 IBTKQ9P2D0 1353 aaPredicted RBP18.64■□□□□ 0.57
CDPF1-203ENST00000404583 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
CDPF1-203ENST00000404583 TRMT112Q9UI30 125 aaKnown RBP18.64■□□□□ 0.57
CDPF1-203ENST00000404583 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
CDPF1-203ENST00000404583 COL11A2P13942 1736 aaPredicted RBP18.63■□□□□ 0.57
CDPF1-203ENST00000404583 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
CDPF1-203ENST00000404583 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
CDPF1-203ENST00000404583 MRPL50Q8N5N7 158 aaKnown RBP18.63■□□□□ 0.57
CDPF1-203ENST00000404583 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
CDPF1-203ENST00000404583 BCS1LQ9Y276 419 aa18.63■□□□□ 0.57
CDPF1-203ENST00000404583 ZNF622Q969S3 477 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDPF1-203ENST00000404583 PDZRN3Q9UPQ7 1066 aa18.62■□□□□ 0.57
CDPF1-203ENST00000404583 TNRC6CQ9HCJ0 1690 aaKnown RBP18.61■□□□□ 0.57
CDPF1-203ENST00000404583 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
CDPF1-203ENST00000404583 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
CDPF1-203ENST00000404583 DNAAF4Q8WXU2 420 aa18.61■□□□□ 0.57
CDPF1-203ENST00000404583 F6X3S4 739 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 SRGNP10124 158 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 NEXNQ0ZGT2 675 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 DALRD3Q5D0E6 543 aaKnown RBP18.6■□□□□ 0.57
CDPF1-203ENST00000404583 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
CDPF1-203ENST00000404583 SLC10A5Q5PT55 438 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 CCDC191Q8NCU4 936 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 FAM89AQ96GI7 184 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 CACNA1SQ13698 1873 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
CDPF1-203ENST00000404583 HCLS1P14317 486 aaPredicted RBP18.59■□□□□ 0.57
CDPF1-203ENST00000404583 MASTLQ96GX5 879 aa18.59■□□□□ 0.57
CDPF1-203ENST00000404583 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
CDPF1-203ENST00000404583 ARFGEF1Q9Y6D6 1849 aa18.58■□□□□ 0.57
CDPF1-203ENST00000404583 GRIN3BO60391 1043 aa18.58■□□□□ 0.57
CDPF1-203ENST00000404583 CWF19L2Q2TBE0 894 aaKnown RBP18.58■□□□□ 0.57
CDPF1-203ENST00000404583 C3orf67Q6ZVT6 689 aa18.58■□□□□ 0.57
CDPF1-203ENST00000404583 TTLL6Q8N841 843 aa18.58■□□□□ 0.57
CDPF1-203ENST00000404583 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.57
CDPF1-203ENST00000404583 CWC25Q9NXE8 425 aaPredicted RBP18.58■□□□□ 0.57
CDPF1-203ENST00000404583 NPR1P16066 1061 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 STYK1Q6J9G0 422 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
CDPF1-203ENST00000404583 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
CDPF1-203ENST00000404583 NLRP3Q96P20 1036 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
CDPF1-203ENST00000404583 LAMB2P55268 1798 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
CDPF1-203ENST00000404583 CRY2Q49AN0 593 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 SLX4Q8IY92 1834 aa18.57■□□□□ 0.56
CDPF1-203ENST00000404583 CNKSR1Q969H4 720 aa18.56■□□□□ 0.56
CDPF1-203ENST00000404583 IRS4O14654 1257 aaPredicted RBP18.55■□□□□ 0.56
CDPF1-203ENST00000404583 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
CDPF1-203ENST00000404583 SLC4A10Q6U841 1118 aa18.55■□□□□ 0.56
CDPF1-203ENST00000404583 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
CDPF1-203ENST00000404583 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
CDPF1-203ENST00000404583 PTPRCP08575 1304 aa18.55■□□□□ 0.56
CDPF1-203ENST00000404583 BEND3Q5T5X7 828 aa18.54■□□□□ 0.56
CDPF1-203ENST00000404583 RPGRQ92834 1020 aaKnown RBP18.54■□□□□ 0.56
CDPF1-203ENST00000404583 GCKRQ14397 625 aa18.53■□□□□ 0.56
CDPF1-203ENST00000404583 PRPF40BQ6NWY9 871 aaKnown RBP18.53■□□□□ 0.56
CDPF1-203ENST00000404583 ARHGAP27Q6ZUM4 889 aa18.53■□□□□ 0.56
CDPF1-203ENST00000404583 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
CDPF1-203ENST00000404583 C21orf2O43822 256 aa18.52■□□□□ 0.56
CDPF1-203ENST00000404583 ALDH1B1P30837 517 aa18.52■□□□□ 0.56
CDPF1-203ENST00000404583 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.56
CDPF1-203ENST00000404583 BRPF1P55201 1214 aaPredicted RBP18.52■□□□□ 0.56
CDPF1-203ENST00000404583 C1QTNF8P60827 252 aa18.52■□□□□ 0.56
CDPF1-203ENST00000404583 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
CDPF1-203ENST00000404583 TAF1P21675 1872 aa18.52■□□□□ 0.56
CDPF1-203ENST00000404583 BCAR3O75815 825 aa18.51■□□□□ 0.55
CDPF1-203ENST00000404583 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
CDPF1-203ENST00000404583 H7C1W4 665 aa18.5■□□□□ 0.55
CDPF1-203ENST00000404583 PDE8AO60658 829 aa18.49■□□□□ 0.55
CDPF1-203ENST00000404583 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
CDPF1-203ENST00000404583 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
CDPF1-203ENST00000404583 ZNF526Q8TF50 670 aaPredicted RBP18.49■□□□□ 0.55
CDPF1-203ENST00000404583 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
CDPF1-203ENST00000404583 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
CDPF1-203ENST00000404583 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
CDPF1-203ENST00000404583 HSP90B1P14625 803 aaKnown RBP18.49■□□□□ 0.55
CDPF1-203ENST00000404583 C7orf43Q8WVR3 580 aa18.49■□□□□ 0.55
CDPF1-203ENST00000404583 MYH3P11055 1940 aa18.48■□□□□ 0.55
CDPF1-203ENST00000404583 ABCC4O15439 1325 aa18.48■□□□□ 0.55
CDPF1-203ENST00000404583 ALDH1L1O75891 902 aa18.48■□□□□ 0.55
CDPF1-203ENST00000404583 CASP7P55210 303 aa18.48■□□□□ 0.55
CDPF1-203ENST00000404583 OLFM4Q6UX06 510 aa18.48■□□□□ 0.55
CDPF1-203ENST00000404583 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
CDPF1-203ENST00000404583 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
CDPF1-203ENST00000404583 SBF1O95248 1867 aa18.47■□□□□ 0.55
CDPF1-203ENST00000404583 FER1L6Q2WGJ9 1857 aa18.47■□□□□ 0.55
CDPF1-203ENST00000404583 CCDC88AQ3V6T2 1871 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms