RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 ANKRD31Q8N7Z5 1873 aa12.73□□□□□ -0.37
NUP43-204ENST00000403890 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
NUP43-204ENST00000403890 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
NUP43-204ENST00000403890 FZD9O00144 591 aa12.72□□□□□ -0.37
NUP43-204ENST00000403890 ST5P78524 1137 aa12.72□□□□□ -0.37
NUP43-204ENST00000403890 DGKZQ13574 1117 aa12.72□□□□□ -0.37
NUP43-204ENST00000403890 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
NUP43-204ENST00000403890 GPC2Q8N158 579 aa12.72□□□□□ -0.37
NUP43-204ENST00000403890 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
NUP43-204ENST00000403890 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
NUP43-204ENST00000403890 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.37
NUP43-204ENST00000403890 CST9Q5W186 159 aa12.71□□□□□ -0.37
NUP43-204ENST00000403890 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
NUP43-204ENST00000403890 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
NUP43-204ENST00000403890 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
NUP43-204ENST00000403890 RNMTO43148 476 aaKnown RBP12.7□□□□□ -0.38
NUP43-204ENST00000403890 AOC2O75106 756 aa12.7□□□□□ -0.38
NUP43-204ENST00000403890 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
NUP43-204ENST00000403890 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
NUP43-204ENST00000403890 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
NUP43-204ENST00000403890 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
NUP43-204ENST00000403890 NPR1P16066 1061 aa12.69□□□□□ -0.38
NUP43-204ENST00000403890 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
NUP43-204ENST00000403890 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
NUP43-204ENST00000403890 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
NUP43-204ENST00000403890 THSD7BQ9C0I4 1608 aa12.69□□□□□ -0.38
NUP43-204ENST00000403890 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
NUP43-204ENST00000403890 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
NUP43-204ENST00000403890 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
NUP43-204ENST00000403890 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
NUP43-204ENST00000403890 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
NUP43-204ENST00000403890 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
NUP43-204ENST00000403890 SCN11AQ9UI33 1791 aa12.68□□□□□ -0.38
NUP43-204ENST00000403890 TRAF5O00463 557 aa12.67□□□□□ -0.38
NUP43-204ENST00000403890 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
NUP43-204ENST00000403890 EIF6P56537 245 aaKnown RBP12.67□□□□□ -0.38
NUP43-204ENST00000403890 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
NUP43-204ENST00000403890 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
NUP43-204ENST00000403890 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
NUP43-204ENST00000403890 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
NUP43-204ENST00000403890 COLQQ9Y215 455 aaPredicted RBP12.67□□□□□ -0.38
NUP43-204ENST00000403890 GJA3Q9Y6H8 435 aa12.67□□□□□ -0.38
NUP43-204ENST00000403890 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
NUP43-204ENST00000403890 EPS15P42566 896 aa12.66□□□□□ -0.38
NUP43-204ENST00000403890 USP50Q70EL3 339 aaPredicted RBP12.66□□□□□ -0.38
NUP43-204ENST00000403890 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
NUP43-204ENST00000403890 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.38
NUP43-204ENST00000403890 HHIPL1Q96JK4 782 aa12.65□□□□□ -0.38
NUP43-204ENST00000403890 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
NUP43-204ENST00000403890 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
NUP43-204ENST00000403890 MRC1P22897 1456 aa12.65□□□□□ -0.38
NUP43-204ENST00000403890 CACNA1SQ13698 1873 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 A1BGP04217 495 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 IL13P35225 146 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 SOX10P56693 466 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 ZNF496Q96IT1 587 aaPredicted RBP12.64□□□□□ -0.39
NUP43-204ENST00000403890 PSMD1Q99460 953 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
NUP43-204ENST00000403890 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
NUP43-204ENST00000403890 SCNN1DP51172 638 aa12.63□□□□□ -0.39
NUP43-204ENST00000403890 CLEC4GQ6UXB4 293 aa12.63□□□□□ -0.39
NUP43-204ENST00000403890 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
NUP43-204ENST00000403890 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
NUP43-204ENST00000403890 PLCG2P16885 1265 aa12.62□□□□□ -0.39
NUP43-204ENST00000403890 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 NOGQ13253 232 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 MTHFSDQ2M296 383 aaKnown RBP12.61□□□□□ -0.39
NUP43-204ENST00000403890 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 MORC1Q86VD1 984 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
NUP43-204ENST00000403890 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
NUP43-204ENST00000403890 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
NUP43-204ENST00000403890 ADARB2Q9NS39 739 aaKnown RBP12.6□□□□□ -0.39
NUP43-204ENST00000403890 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
NUP43-204ENST00000403890 TEFQ10587 303 aa12.59□□□□□ -0.39
NUP43-204ENST00000403890 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
NUP43-204ENST00000403890 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
NUP43-204ENST00000403890 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
NUP43-204ENST00000403890 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
NUP43-204ENST00000403890 HMOX1P09601 288 aa12.58□□□□□ -0.4
NUP43-204ENST00000403890 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
NUP43-204ENST00000403890 LCE2DQ5TA82 110 aaPredicted RBP12.58□□□□□ -0.4
NUP43-204ENST00000403890 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
NUP43-204ENST00000403890 ZNF408Q9H9D4 720 aa12.58□□□□□ -0.4
NUP43-204ENST00000403890 PGAP2Q9UHJ9 254 aa12.58□□□□□ -0.4
NUP43-204ENST00000403890 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
NUP43-204ENST00000403890 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
NUP43-204ENST00000403890 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
NUP43-204ENST00000403890 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
NUP43-204ENST00000403890 PANK3Q9H999 370 aa12.57□□□□□ -0.4
NUP43-204ENST00000403890 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
NUP43-204ENST00000403890 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
NUP43-204ENST00000403890 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
NUP43-204ENST00000403890 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
NUP43-204ENST00000403890 CDC37L1Q7L3B6 337 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms