RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PDE3BQ13370 1112 aa6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 RIPOR1Q6ZS17 1223 aa6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 CEP63Q96MT8 703 aa6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 CITED4Q96RK1 184 aa6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 ZCCHC2Q9C0B9 1178 aaKnown RBP6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 FOXD3Q9UJU5 478 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 F11P03951 625 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 ARSDP51689 593 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 TYRO3Q06418 890 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 GRIN2CQ14957 1233 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 WDR44Q5JSH3 913 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 USPL1Q5W0Q7 1092 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 PIK3R5Q8WYR1 880 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 DUSP9Q99956 384 aaKnown RBP6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 KCNMB2Q9Y691 235 aa6.47□□□□□ -1.37
HMGB1P17-201ENST00000403495 UBAP1LF5GYI3 381 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 PCSK2P16519 638 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 PTSQ03393 145 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 IER5Q5VY09 327 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 CRIPAKQ8N1N5 446 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 CUEDC1Q9NWM3 386 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 ANKIB1Q9P2G1 1089 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 DYRK1BQ9Y463 629 aa6.46□□□□□ -1.38
HMGB1P17-201ENST00000403495 DCDC2BA2VCK2 349 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 EIF1AYO14602 144 aaKnown RBP6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 USP5P45974 858 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 ENOX2Q16206 610 aaKnown RBP6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 HIF1AQ16665 826 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 KRT25Q7Z3Z0 450 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 PGBD3Q8N328 593 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 TTC16Q8NEE8 873 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 ALKBH8Q96BT7 664 aaKnown RBP6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 CSRNP1Q96S65 589 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 CFHR5Q9BXR6 569 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 CRISPLD1Q9H336 500 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 BRD7Q9NPI1 651 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 TMEM63CQ9P1W3 806 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 PARP2Q9UGN5 583 aa6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 GPC6Q9Y625 555 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P17-201ENST00000403495 RECKO95980 971 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 POLR3DP05423 398 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 IRS1P35568 1242 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 SFSWAPQ12872 951 aaKnown RBP6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 COL19A1Q14993 1142 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 TSNAXIP1Q2TAA8 658 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 ZNF438Q7Z4V0 828 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 STRN4Q9NRL3 753 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 FAM13BQ9NYF5 915 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 GMPR2Q9P2T1 348 aaKnown RBP6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 HCN2Q9UL51 889 aa6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P17-201ENST00000403495 KHNYNO15037 678 aaKnown RBP6.43□□□□□ -1.38
HMGB1P17-201ENST00000403495 XYLBO75191 536 aa6.43□□□□□ -1.38
HMGB1P17-201ENST00000403495 PRPF40AO75400 957 aaKnown RBP6.43□□□□□ -1.38
HMGB1P17-201ENST00000403495 TNFRSF21O75509 655 aa6.43□□□□□ -1.38
HMGB1P17-201ENST00000403495 SLC35F4A4IF30 521 aa6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 SNRPBP14678 240 aaKnown RBP6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 XPCQ01831 940 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 DBN1Q16643 649 aa6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 EPS8L3Q8TE67 593 aaKnown RBP6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 ELP3Q9H9T3 547 aa6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
HMGB1P17-201ENST00000403495 ATXN7O15265 892 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 SASH3O75995 380 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 CYP2E1P05181 493 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 PSMD2Q13200 908 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 UBAP2LQ14157 1087 aaKnown RBP6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 RAB44Q7Z6P3 723 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 NLRP8Q86W28 1048 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 CCDC155Q8N6L0 562 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 C1orf127Q8N9H9 656 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 ABHD17AQ96GS6 310 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 BACH2Q9BYV9 841 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 NUCKS1Q9H1E3 243 aaKnown RBP6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 IGSF5Q9NSI5 407 aa6.41□□□□□ -1.38
HMGB1P17-201ENST00000403495 EREGO14944 169 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 CPNE3O75131 537 aaKnown RBP6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 PHACTR2O75167 634 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 TARSP26639 723 aaKnown RBP6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 MRPL58Q14197 206 aaKnown RBP6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 LDLRAD1Q5T700 205 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 C9orf131Q5VYM1 1079 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 CHRDQ9H2X0 955 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 KANSL3Q9P2N6 904 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 KCNH4Q9UQ05 1017 aa6.4□□□□□ -1.38
HMGB1P17-201ENST00000403495 GPR25O00155 361 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 LCE2BO14633 110 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 BNIP3LO60238 219 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 MAPTP10636 758 aaKnown RBP6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 EPB42P16452 691 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 CD33P20138 364 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 DAB2P98082 770 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 SAMD5Q5TGI4 173 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 SNX29Q8TEQ0 813 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms