RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 GORABQ5T7V8 394 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 VPS53Q5VIR6 699 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 A0A0D9SFI3 127 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 ZSCAN20P17040 1043 aaPredicted RBP10.85□□□□□ -0.67
HPS4-203ENST00000402105 PROSER3Q2NL68 480 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 ISM2Q6H9L7 571 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 ZNF530Q6P9A1 599 aaPredicted RBP10.85□□□□□ -0.67
HPS4-203ENST00000402105 CHST3Q7LGC8 479 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 RNF20Q5VTR2 975 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 RAB11FIP4Q86YS3 637 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 SH2B1Q9NRF2 756 aaPredicted RBP10.85□□□□□ -0.67
HPS4-203ENST00000402105 PSMA5P28066 241 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 RIC3Q7Z5B4 369 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 PODXL2Q9NZ53 605 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
HPS4-203ENST00000402105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.85□□□□□ -0.67
HPS4-203ENST00000402105 CCDC171Q6TFL3 1326 aa10.84□□□□□ -0.67
HPS4-203ENST00000402105 ERICH4A6NGS2 130 aa10.84□□□□□ -0.67
HPS4-203ENST00000402105 SLC27A2O14975 620 aa10.84□□□□□ -0.67
HPS4-203ENST00000402105 HOXC9P31274 260 aa10.84□□□□□ -0.67
HPS4-203ENST00000402105 BRF1Q92994 677 aa10.84□□□□□ -0.67
HPS4-203ENST00000402105 EAF2Q96CJ1 260 aaPredicted RBP10.84□□□□□ -0.67
HPS4-203ENST00000402105 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
HPS4-203ENST00000402105 PDCP20941 246 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 ST3GAL1Q11201 340 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 SLFNL1Q499Z3 407 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 BEND3Q5T5X7 828 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 EVI5LQ96CN4 794 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 SEC62Q99442 399 aaKnown RBP10.83□□□□□ -0.67
HPS4-203ENST00000402105 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.67
HPS4-203ENST00000402105 CGNQ9P2M7 1197 aaKnown RBP10.83□□□□□ -0.67
HPS4-203ENST00000402105 BIN1O00499 593 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 LTKP29376 864 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 ME1P48163 572 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 DMTNQ08495 405 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 CACTINQ8WUQ7 758 aaKnown RBP10.83□□□□□ -0.68
HPS4-203ENST00000402105 MYO5BQ9ULV0 1848 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 FLT4P35916 1363 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 TCHHQ07283 1943 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 TPM3P06753 285 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 ZSCAN25Q6NSZ9 544 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 ZNF589Q86UQ0 364 aaPredicted RBP10.83□□□□□ -0.68
HPS4-203ENST00000402105 TMEM87AQ8NBN3 555 aa10.83□□□□□ -0.68
HPS4-203ENST00000402105 LEO1Q8WVC0 666 aaPredicted RBP10.83□□□□□ -0.68
HPS4-203ENST00000402105 DDX46Q7L014 1031 aaKnown RBP10.82□□□□□ -0.68
HPS4-203ENST00000402105 STK11IPQ8N1F8 1099 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 TRERF1Q96PN7 1200 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 SDF4Q9BRK5 362 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 SCAND2PQ9GZW5 306 aaPredicted RBP10.82□□□□□ -0.68
HPS4-203ENST00000402105 BICC1Q9H694 974 aaKnown RBP10.82□□□□□ -0.68
HPS4-203ENST00000402105 SLC39A6Q13433 755 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
HPS4-203ENST00000402105 CCDC144BQ3MJ40 725 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 C1orf141Q5JVX7 400 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 FUCA2Q9BTY2 467 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 SPTLC3Q9NUV7 552 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 EID1Q9Y6B2 187 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 SSH2Q76I76 1423 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 USP27XA6NNY8 438 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 ZNF75DP51815 510 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 CEP135Q66GS9 1140 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 Q6ZUG5 572 aa10.82□□□□□ -0.68
HPS4-203ENST00000402105 SMC2O95347 1197 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 POLA2Q14181 598 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 FAM177A1Q8N128 213 aaPredicted RBP10.81□□□□□ -0.68
HPS4-203ENST00000402105 SUCLG2Q96I99 432 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 ARHGAP31Q2M1Z3 1444 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 MAP3K5Q99683 1374 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 SKILP12757 684 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 EIF4A1P60842 406 aaKnown RBP10.81□□□□□ -0.68
HPS4-203ENST00000402105 NECTIN1Q15223 517 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
HPS4-203ENST00000402105 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 NCOA5Q9HCD5 579 aaKnown RBP10.81□□□□□ -0.68
HPS4-203ENST00000402105 PTPN14Q15678 1187 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 CCDC73Q6ZRK6 1079 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 TMX1Q9H3N1 280 aa10.81□□□□□ -0.68
HPS4-203ENST00000402105 ZNF330Q9Y3S2 320 aaPredicted RBP10.81□□□□□ -0.68
HPS4-203ENST00000402105 KIF20BQ96Q89 1820 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 NCBP1Q09161 790 aaKnown RBP10.8□□□□□ -0.68
HPS4-203ENST00000402105 PTPN21Q16825 1174 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 OTUD7BQ6GQQ9 843 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 PGBD1Q96JS3 809 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 A2ML1A8K2U0 1454 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 DLG5Q8TDM6 1919 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 ATP5J2-PTCD1G3V325 749 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 KINO60870 393 aaKnown RBP10.8□□□□□ -0.68
HPS4-203ENST00000402105 PTCD1O75127 700 aaKnown RBP10.8□□□□□ -0.68
HPS4-203ENST00000402105 C11orf57Q6ZUT1 292 aaPredicted RBP10.8□□□□□ -0.68
HPS4-203ENST00000402105 PLEKHG3A1L390 1219 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
HPS4-203ENST00000402105 DBF4Q9UBU7 674 aaPredicted RBP10.8□□□□□ -0.68
HPS4-203ENST00000402105 AOX1Q06278 1338 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 TTC41PQ6P2S7 1318 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 IGSF1Q8N6C5 1336 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 SASH1O94885 1247 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 POLR3DP05423 398 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms