RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
SNED1-203ENST00000401644 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
SNED1-203ENST00000401644 METTL22Q9BUU2 404 aaPredicted RBP17.33■□□□□ 0.36
SNED1-203ENST00000401644 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
SNED1-203ENST00000401644 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
SNED1-203ENST00000401644 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
SNED1-203ENST00000401644 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
SNED1-203ENST00000401644 ZNF784Q8NCA9 323 aaPredicted RBP17.32■□□□□ 0.36
SNED1-203ENST00000401644 TRMT112Q9UI30 125 aaKnown RBP17.32■□□□□ 0.36
SNED1-203ENST00000401644 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
SNED1-203ENST00000401644 ANKRD31Q8N7Z5 1873 aa17.32■□□□□ 0.36
SNED1-203ENST00000401644 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
SNED1-203ENST00000401644 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 ERFEQ4G0M1 354 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 SLC10A5Q5PT55 438 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 STYK1Q6J9G0 422 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 NUTM1Q86Y26 1132 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 MYD88Q99836 296 aa17.31■□□□□ 0.36
SNED1-203ENST00000401644 BRCA1P38398 1863 aaKnown RBP17.31■□□□□ 0.36
SNED1-203ENST00000401644 SH3TC1Q8TE82 1336 aa17.3■□□□□ 0.36
SNED1-203ENST00000401644 SRGNP10124 158 aa17.3■□□□□ 0.36
SNED1-203ENST00000401644 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
SNED1-203ENST00000401644 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
SNED1-203ENST00000401644 ZNF622Q969S3 477 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNED1-203ENST00000401644 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
SNED1-203ENST00000401644 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
SNED1-203ENST00000401644 NPR1P16066 1061 aa17.29■□□□□ 0.36
SNED1-203ENST00000401644 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
SNED1-203ENST00000401644 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
SNED1-203ENST00000401644 ADCY9O60503 1353 aa17.28■□□□□ 0.36
SNED1-203ENST00000401644 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
SNED1-203ENST00000401644 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
SNED1-203ENST00000401644 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
SNED1-203ENST00000401644 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.36
SNED1-203ENST00000401644 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
SNED1-203ENST00000401644 CRY2Q49AN0 593 aa17.27■□□□□ 0.36
SNED1-203ENST00000401644 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
SNED1-203ENST00000401644 SSH1Q8WYL5 1049 aa17.27■□□□□ 0.36
SNED1-203ENST00000401644 ABCC12Q96J65 1359 aa17.27■□□□□ 0.35
SNED1-203ENST00000401644 PTPRCP08575 1304 aa17.25■□□□□ 0.35
SNED1-203ENST00000401644 PCCAP05165 728 aaPredicted RBP17.25■□□□□ 0.35
SNED1-203ENST00000401644 IGKV5-2P06315 115 aa17.25■□□□□ 0.35
SNED1-203ENST00000401644 LINS1Q8NG48 757 aa17.25■□□□□ 0.35
SNED1-203ENST00000401644 RPGRQ92834 1020 aaKnown RBP17.25■□□□□ 0.35
SNED1-203ENST00000401644 FAM89AQ96GI7 184 aa17.25■□□□□ 0.35
SNED1-203ENST00000401644 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
SNED1-203ENST00000401644 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
SNED1-203ENST00000401644 HCLS1P14317 486 aaPredicted RBP17.24■□□□□ 0.35
SNED1-203ENST00000401644 HOXA10P31260 410 aaPredicted RBP17.24■□□□□ 0.35
SNED1-203ENST00000401644 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
SNED1-203ENST00000401644 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
SNED1-203ENST00000401644 IRS4O14654 1257 aaPredicted RBP17.23■□□□□ 0.35
SNED1-203ENST00000401644 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
SNED1-203ENST00000401644 SYNE4Q8N205 404 aa17.23■□□□□ 0.35
SNED1-203ENST00000401644 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
SNED1-203ENST00000401644 COL11A2P13942 1736 aaPredicted RBP17.23■□□□□ 0.35
SNED1-203ENST00000401644 F6X3S4 739 aa17.22■□□□□ 0.35
SNED1-203ENST00000401644 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
SNED1-203ENST00000401644 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
SNED1-203ENST00000401644 GCKRQ14397 625 aa17.21■□□□□ 0.35
SNED1-203ENST00000401644 SF3B3Q15393 1217 aaKnown RBP17.21■□□□□ 0.35
SNED1-203ENST00000401644 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
SNED1-203ENST00000401644 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
SNED1-203ENST00000401644 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
SNED1-203ENST00000401644 SLX4Q8IY92 1834 aa17.21■□□□□ 0.35
SNED1-203ENST00000401644 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.34
SNED1-203ENST00000401644 H7C1W4 665 aa17.2■□□□□ 0.34
SNED1-203ENST00000401644 PDE8AO60658 829 aa17.2■□□□□ 0.34
SNED1-203ENST00000401644 ALDH1L1O75891 902 aa17.2■□□□□ 0.34
SNED1-203ENST00000401644 RTL5Q5HYW3 569 aaPredicted RBP17.2■□□□□ 0.34
SNED1-203ENST00000401644 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
SNED1-203ENST00000401644 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
SNED1-203ENST00000401644 C21orf2O43822 256 aa17.19■□□□□ 0.34
SNED1-203ENST00000401644 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
SNED1-203ENST00000401644 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
SNED1-203ENST00000401644 C3orf67Q6ZVT6 689 aa17.19■□□□□ 0.34
SNED1-203ENST00000401644 SRCIN1Q9C0H9 1055 aa17.19■□□□□ 0.34
SNED1-203ENST00000401644 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
SNED1-203ENST00000401644 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 IPO8O15397 1037 aaKnown RBP17.18■□□□□ 0.34
SNED1-203ENST00000401644 BBOX1O75936 387 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 GRIPAP1Q4V328 841 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 C7orf43Q8WVR3 580 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
SNED1-203ENST00000401644 NOB1Q9ULX3 412 aaKnown RBP17.18■□□□□ 0.34
SNED1-203ENST00000401644 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
SNED1-203ENST00000401644 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
SNED1-203ENST00000401644 LAMB2P55268 1798 aa17.17■□□□□ 0.34
SNED1-203ENST00000401644 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
SNED1-203ENST00000401644 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
SNED1-203ENST00000401644 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
SNED1-203ENST00000401644 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
SNED1-203ENST00000401644 GRAPQ13588 217 aa17.16■□□□□ 0.34
SNED1-203ENST00000401644 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms