RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 DPH6Q7L8W6 267 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 MICU3Q86XE3 530 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 TRIM47Q96LD4 638 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
CR1-206ENST00000400960 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
CR1-206ENST00000400960 MPRIPQ6WCQ1 1025 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 FAM114A1Q8IWE2 563 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 NKTRP30414 1462 aaKnown RBP9.94□□□□□ -0.82
CR1-206ENST00000400960 METAP2P50579 478 aaKnown RBP eCLIP9.94□□□□□ -0.82
CR1-206ENST00000400960 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 CCDC155Q8N6L0 562 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 UBASH3AP57075 661 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 LRRC2Q9BYS8 371 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 SYNCQ9H7C4 482 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 SNRKQ9NRH2 765 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 WDR70Q9NW82 654 aa9.94□□□□□ -0.82
CR1-206ENST00000400960 HSPA4P34932 840 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 ARID5AQ03989 594 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 SSH1Q8WYL5 1049 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 RPGRQ92834 1020 aaKnown RBP9.93□□□□□ -0.82
CR1-206ENST00000400960 TIGD1Q96MW7 591 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 KAT14Q9H8E8 782 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 PRDM11Q9NQV5 511 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
CR1-206ENST00000400960 MAP3K2Q9Y2U5 619 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 AMPD3Q01432 767 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 MCM6Q14566 821 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 KIAA0753Q2KHM9 967 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 GSTA5Q7RTV2 222 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 PSMC4P43686 418 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 DNAJC21Q5F1R6 531 aaKnown RBP9.93□□□□□ -0.82
CR1-206ENST00000400960 TRMT112Q9UI30 125 aaKnown RBP9.93□□□□□ -0.82
CR1-206ENST00000400960 TBC1D5Q92609 795 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 FCHSD2O94868 740 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 DAAM2Q86T65 1068 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 MRVI1Q9Y6F6 885 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 HCLS1P14317 486 aaPredicted RBP9.93□□□□□ -0.82
CR1-206ENST00000400960 TCP11L1Q9NUJ3 509 aa9.93□□□□□ -0.82
CR1-206ENST00000400960 RARSP54136 660 aaKnown RBP9.92□□□□□ -0.82
CR1-206ENST00000400960 ZNF652Q9Y2D9 606 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 NEMFO60524 1076 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 ECM2O94769 699 aaPredicted RBP9.92□□□□□ -0.82
CR1-206ENST00000400960 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 PAXBP1Q9Y5B6 917 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 KIF20AO95235 890 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 KIAA1107Q9UPP5 1409 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 CKAP4Q07065 602 aaKnown RBP9.92□□□□□ -0.82
CR1-206ENST00000400960 CETN1Q12798 172 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 VPS18Q9P253 973 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 C9orf84Q5VXU9 1444 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 ERICH3Q5RHP9 1530 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 N4BP3O15049 544 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 DNAI1Q9UI46 699 aa9.92□□□□□ -0.82
CR1-206ENST00000400960 STAT6P42226 847 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 ZNF165P49910 485 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 AKNAD1Q5T1N1 836 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 EVI5LQ96CN4 794 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 NAP1L3Q99457 506 aaPredicted RBP9.91□□□□□ -0.82
CR1-206ENST00000400960 SSX2IPQ9Y2D8 614 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 TSPY2A6NKD2 308 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 IARSP41252 1262 aaKnown RBP9.91□□□□□ -0.82
CR1-206ENST00000400960 TMCO4Q5TGY1 634 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 CCDC50Q8IVM0 306 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 ATRIPQ8WXE1 791 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 ZWINTO95229 277 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 CFAP57Q96MR6 1250 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
CR1-206ENST00000400960 DYNC1I1O14576 645 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
CR1-206ENST00000400960 WAPLQ7Z5K2 1190 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 ZMYND15Q9H091 742 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 BBXQ8WY36 941 aaPredicted RBP9.91□□□□□ -0.82
CR1-206ENST00000400960 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 ORC3Q9UBD5 711 aaPredicted RBP9.91□□□□□ -0.82
CR1-206ENST00000400960 ATP5J2-PTCD1G3V325 749 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 PPARDQ03181 441 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 MFSD6Q6ZSS7 791 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 USP48Q86UV5 1035 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
CR1-206ENST00000400960 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
CR1-206ENST00000400960 SYKP43405 635 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 UBE2HP62256 183 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 FAM160A1Q05DH4 1040 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 IQCGQ9H095 443 aaKnown RBP9.9□□□□□ -0.82
CR1-206ENST00000400960 ZBTB3Q9H5J0 574 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 AQRO60306 1485 aaKnown RBP eCLIP9.9□□□□□ -0.82
CR1-206ENST00000400960 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
CR1-206ENST00000400960 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 HEATR3Q7Z4Q2 680 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 KRT222Q8N1A0 295 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 FAM212AQ96EL1 285 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.82
CR1-206ENST00000400960 NUDT16Q96DE0 195 aaKnown RBP9.9□□□□□ -0.82
CR1-206ENST00000400960 CCDC171Q6TFL3 1326 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 IGSF3O75054 1194 aa9.9□□□□□ -0.82
CR1-206ENST00000400960 EEF2P13639 858 aaKnown RBP9.9□□□□□ -0.82
CR1-206ENST00000400960 RAB3IL1Q8TBN0 382 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms