RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
ATG4B-203ENST00000400772 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
ATG4B-203ENST00000400772 HSP90AB3PQ58FF7 597 aa20.58■□□□□ 0.89
ATG4B-203ENST00000400772 SLC10A5Q5PT55 438 aa20.58■□□□□ 0.89
ATG4B-203ENST00000400772 SOGA3Q5TF21 947 aa20.58■□□□□ 0.89
ATG4B-203ENST00000400772 NLRP10Q86W26 655 aa20.58■□□□□ 0.89
ATG4B-203ENST00000400772 TAOK3Q9H2K8 898 aa20.58■□□□□ 0.89
ATG4B-203ENST00000400772 HOXA10P31260 410 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-203ENST00000400772 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
ATG4B-203ENST00000400772 ANKRD13DQ6ZTN6 518 aa20.57■□□□□ 0.88
ATG4B-203ENST00000400772 PLBD2Q8NHP8 589 aa20.57■□□□□ 0.88
ATG4B-203ENST00000400772 HYPKQ9NX55 129 aa20.57■□□□□ 0.88
ATG4B-203ENST00000400772 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
ATG4B-203ENST00000400772 SYNE4Q8N205 404 aa20.56■□□□□ 0.88
ATG4B-203ENST00000400772 TSPYL6Q8N831 410 aa20.56■□□□□ 0.88
ATG4B-203ENST00000400772 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
ATG4B-203ENST00000400772 CCDC93Q567U6 631 aa20.55■□□□□ 0.88
ATG4B-203ENST00000400772 TSR2Q969E8 191 aaKnown RBP20.55■□□□□ 0.88
ATG4B-203ENST00000400772 RRAGCQ9HB90 399 aa20.55■□□□□ 0.88
ATG4B-203ENST00000400772 PHAXQ9H814 394 aaKnown RBP20.54■□□□□ 0.88
ATG4B-203ENST00000400772 TOMM70O94826 608 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
ATG4B-203ENST00000400772 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 RBM17Q96I25 401 aaKnown RBP20.53■□□□□ 0.88
ATG4B-203ENST00000400772 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 ISCA1Q9BUE6 129 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 ANKRD36CQ5JPF3 1778 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
ATG4B-203ENST00000400772 FKBP4Q02790 459 aaKnown RBP eCLIP20.52■□□□□ 0.88
ATG4B-203ENST00000400772 SLC51AQ86UW1 340 aa20.52■□□□□ 0.88
ATG4B-203ENST00000400772 RTKN2Q8IZC4 609 aa20.52■□□□□ 0.88
ATG4B-203ENST00000400772 TRMT112Q9UI30 125 aaKnown RBP20.52■□□□□ 0.88
ATG4B-203ENST00000400772 SNED1Q8TER0 1413 aa20.52■□□□□ 0.87
ATG4B-203ENST00000400772 DICER1Q9UPY3 1922 aaKnown RBP20.51■□□□□ 0.87
ATG4B-203ENST00000400772 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
ATG4B-203ENST00000400772 ATP5J2-PTCD1G3V325 749 aa20.51■□□□□ 0.87
ATG4B-203ENST00000400772 HCLS1P14317 486 aaPredicted RBP20.51■□□□□ 0.87
ATG4B-203ENST00000400772 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
ATG4B-203ENST00000400772 IL16Q14005 1332 aa20.51■□□□□ 0.87
ATG4B-203ENST00000400772 ZNF277Q9NRM2 450 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-203ENST00000400772 SH3TC1Q8TE82 1336 aa20.5■□□□□ 0.87
ATG4B-203ENST00000400772 POTECB2RU33 542 aa20.49■□□□□ 0.87
ATG4B-203ENST00000400772 HSPA6P17066 643 aa20.49■□□□□ 0.87
ATG4B-203ENST00000400772 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
ATG4B-203ENST00000400772 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
ATG4B-203ENST00000400772 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
ATG4B-203ENST00000400772 DPY19L2Q6NUT2 758 aa20.48■□□□□ 0.87
ATG4B-203ENST00000400772 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
ATG4B-203ENST00000400772 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
ATG4B-203ENST00000400772 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
ATG4B-203ENST00000400772 GOLGA2Q08379 1002 aa20.47■□□□□ 0.87
ATG4B-203ENST00000400772 CC2D2BQ6DHV5 1058 aa20.47■□□□□ 0.87
ATG4B-203ENST00000400772 WDR63Q8IWG1 891 aa20.47■□□□□ 0.87
ATG4B-203ENST00000400772 FAM89AQ96GI7 184 aa20.47■□□□□ 0.87
ATG4B-203ENST00000400772 PSMD1Q99460 953 aa20.47■□□□□ 0.87
ATG4B-203ENST00000400772 ABCC4O15439 1325 aa20.47■□□□□ 0.87
ATG4B-203ENST00000400772 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
ATG4B-203ENST00000400772 VEGFAP15692 232 aaPredicted RBP20.46■□□□□ 0.87
ATG4B-203ENST00000400772 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
ATG4B-203ENST00000400772 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
ATG4B-203ENST00000400772 DDNO94850 711 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-203ENST00000400772 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
ATG4B-203ENST00000400772 C16orf71Q8IYS4 520 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-203ENST00000400772 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-203ENST00000400772 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
ATG4B-203ENST00000400772 LAMB2P55268 1798 aa20.44■□□□□ 0.86
ATG4B-203ENST00000400772 MYD88Q99836 296 aa20.44■□□□□ 0.86
ATG4B-203ENST00000400772 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
ATG4B-203ENST00000400772 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
ATG4B-203ENST00000400772 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
ATG4B-203ENST00000400772 FZD9O00144 591 aa20.42■□□□□ 0.86
ATG4B-203ENST00000400772 BBOX1O75936 387 aa20.42■□□□□ 0.86
ATG4B-203ENST00000400772 SF3B3Q15393 1217 aaKnown RBP20.42■□□□□ 0.86
ATG4B-203ENST00000400772 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-203ENST00000400772 METTL22Q9BUU2 404 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-203ENST00000400772 DDX60Q8IY21 1712 aaKnown RBP20.41■□□□□ 0.86
ATG4B-203ENST00000400772 VAMP4O75379 141 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
ATG4B-203ENST00000400772 FSTL1Q12841 308 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 GRAPQ13588 217 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
ATG4B-203ENST00000400772 G2E3Q7L622 706 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 ZBTB38Q8NAP3 1195 aaPredicted RBP20.41■□□□□ 0.86
ATG4B-203ENST00000400772 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
ATG4B-203ENST00000400772 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
ATG4B-203ENST00000400772 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
ATG4B-203ENST00000400772 COL4A5P29400 1685 aa20.4■□□□□ 0.86
ATG4B-203ENST00000400772 KSR2Q6VAB6 950 aa20.4■□□□□ 0.86
ATG4B-203ENST00000400772 CCDC191Q8NCU4 936 aa20.4■□□□□ 0.86
ATG4B-203ENST00000400772 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
ATG4B-203ENST00000400772 PI4KAP2A4QPH2 592 aa20.39■□□□□ 0.85
ATG4B-203ENST00000400772 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
ATG4B-203ENST00000400772 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
ATG4B-203ENST00000400772 PI4KAP1Q8N8J0 262 aa20.39■□□□□ 0.85
ATG4B-203ENST00000400772 CEP350Q5VT06 3117 aa20.39■□□□□ 0.85
ATG4B-203ENST00000400772 TAF1P21675 1872 aa20.39■□□□□ 0.85
ATG4B-203ENST00000400772 IGKV5-2P06315 115 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms