RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 C21orf2O43822 256 aa20.02■□□□□ 0.8
ATG4B-202ENST00000400771 NPR1P16066 1061 aa20.02■□□□□ 0.8
ATG4B-202ENST00000400771 NLRP10Q86W26 655 aa20.02■□□□□ 0.8
ATG4B-202ENST00000400771 PLBD2Q8NHP8 589 aa20.02■□□□□ 0.8
ATG4B-202ENST00000400771 CNKSR1Q969H4 720 aa20.02■□□□□ 0.8
ATG4B-202ENST00000400771 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
ATG4B-202ENST00000400771 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
ATG4B-202ENST00000400771 ZNF521Q96K83 1311 aa20.02■□□□□ 0.79
ATG4B-202ENST00000400771 TCIRG1Q13488 830 aa20.01■□□□□ 0.79
ATG4B-202ENST00000400771 PHAXQ9H814 394 aaKnown RBP20.01■□□□□ 0.79
ATG4B-202ENST00000400771 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-202ENST00000400771 RNF181Q9P0P0 153 aa20.01■□□□□ 0.79
ATG4B-202ENST00000400771 LTBP1Q14766 1721 aa20.01■□□□□ 0.79
ATG4B-202ENST00000400771 WDR90Q96KV7 1748 aa20.01■□□□□ 0.79
ATG4B-202ENST00000400771 LTBP3Q9NS15 1303 aa20.01■□□□□ 0.79
ATG4B-202ENST00000400771 HSP90AB3PQ58FF7 597 aa20■□□□□ 0.79
ATG4B-202ENST00000400771 SLC51AQ86UW1 340 aa20■□□□□ 0.79
ATG4B-202ENST00000400771 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
ATG4B-202ENST00000400771 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
ATG4B-202ENST00000400771 COL4A5P29400 1685 aa20■□□□□ 0.79
ATG4B-202ENST00000400771 PPP1R42Q7Z4L9 355 aa19.99■□□□□ 0.79
ATG4B-202ENST00000400771 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
ATG4B-202ENST00000400771 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
ATG4B-202ENST00000400771 OLFM4Q6UX06 510 aa19.98■□□□□ 0.79
ATG4B-202ENST00000400771 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
ATG4B-202ENST00000400771 WDR63Q8IWG1 891 aa19.98■□□□□ 0.79
ATG4B-202ENST00000400771 SYNE4Q8N205 404 aa19.98■□□□□ 0.79
ATG4B-202ENST00000400771 UTP14AQ9BVJ6 771 aaKnown RBP19.98■□□□□ 0.79
ATG4B-202ENST00000400771 GPBP1L1Q9HC44 474 aaPredicted RBP19.98■□□□□ 0.79
ATG4B-202ENST00000400771 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
ATG4B-202ENST00000400771 DUOX1Q9NRD9 1551 aa19.98■□□□□ 0.79
ATG4B-202ENST00000400771 LMNB1P20700 586 aa19.97■□□□□ 0.79
ATG4B-202ENST00000400771 GTF2E1P29083 439 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-202ENST00000400771 HOXA10P31260 410 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-202ENST00000400771 ZC3H4Q9UPT8 1303 aaKnown RBP19.97■□□□□ 0.79
ATG4B-202ENST00000400771 KIF3CO14782 793 aa19.96■□□□□ 0.79
ATG4B-202ENST00000400771 TWISTNBQ3B726 338 aaPredicted RBP19.96■□□□□ 0.79
ATG4B-202ENST00000400771 SLC10A5Q5PT55 438 aa19.96■□□□□ 0.79
ATG4B-202ENST00000400771 CCDC30Q5VVM6 783 aa19.95■□□□□ 0.78
ATG4B-202ENST00000400771 ATP5J2-PTCD1G3V325 749 aa19.94■□□□□ 0.78
ATG4B-202ENST00000400771 ZNF428Q96B54 188 aa19.94■□□□□ 0.78
ATG4B-202ENST00000400771 TAOK3Q9H2K8 898 aa19.94■□□□□ 0.78
ATG4B-202ENST00000400771 SH3TC1Q8TE82 1336 aa19.94■□□□□ 0.78
ATG4B-202ENST00000400771 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
ATG4B-202ENST00000400771 C1QTNF8P60827 252 aa19.93■□□□□ 0.78
ATG4B-202ENST00000400771 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
ATG4B-202ENST00000400771 CCDC93Q567U6 631 aa19.93■□□□□ 0.78
ATG4B-202ENST00000400771 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
ATG4B-202ENST00000400771 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
ATG4B-202ENST00000400771 ABCC4O15439 1325 aa19.93■□□□□ 0.78
ATG4B-202ENST00000400771 HCLS1P14317 486 aaPredicted RBP19.92■□□□□ 0.78
ATG4B-202ENST00000400771 TRIM28Q13263 835 aaKnown RBP19.92■□□□□ 0.78
ATG4B-202ENST00000400771 G2E3Q7L622 706 aa19.92■□□□□ 0.78
ATG4B-202ENST00000400771 CRAMP1Q96RY5 1269 aa19.92■□□□□ 0.78
ATG4B-202ENST00000400771 TRMT112Q9UI30 125 aaKnown RBP19.92■□□□□ 0.78
ATG4B-202ENST00000400771 A0A1B0GUL6 1792 aa19.91■□□□□ 0.78
ATG4B-202ENST00000400771 SCN4AP35499 1836 aa19.91■□□□□ 0.78
ATG4B-202ENST00000400771 ALDH1B1P30837 517 aa19.91■□□□□ 0.78
ATG4B-202ENST00000400771 EXOSC9Q06265 439 aaKnown RBP19.91■□□□□ 0.78
ATG4B-202ENST00000400771 RPGRQ92834 1020 aaKnown RBP19.91■□□□□ 0.78
ATG4B-202ENST00000400771 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
ATG4B-202ENST00000400771 VAMP4O75379 141 aa19.9■□□□□ 0.78
ATG4B-202ENST00000400771 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
ATG4B-202ENST00000400771 RIC3Q7Z5B4 369 aa19.9■□□□□ 0.78
ATG4B-202ENST00000400771 FAM89AQ96GI7 184 aa19.89■□□□□ 0.77
ATG4B-202ENST00000400771 NLRP3Q96P20 1036 aa19.89■□□□□ 0.77
ATG4B-202ENST00000400771 MYD88Q99836 296 aa19.89■□□□□ 0.77
ATG4B-202ENST00000400771 METTL22Q9BUU2 404 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-202ENST00000400771 CEP350Q5VT06 3117 aa19.88■□□□□ 0.77
ATG4B-202ENST00000400771 PPEF1O14829 653 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-202ENST00000400771 RBM17Q96I25 401 aaKnown RBP19.88■□□□□ 0.77
ATG4B-202ENST00000400771 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
ATG4B-202ENST00000400771 IGKV5-2P06315 115 aa19.87■□□□□ 0.77
ATG4B-202ENST00000400771 STK31Q9BXU1 1019 aa19.87■□□□□ 0.77
ATG4B-202ENST00000400771 CHMP4AQ9BY43 222 aa19.87■□□□□ 0.77
ATG4B-202ENST00000400771 MAP3K2Q9Y2U5 619 aa19.87■□□□□ 0.77
ATG4B-202ENST00000400771 KDM2BQ8NHM5 1336 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 PI4KAP2A4QPH2 592 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 FLIIQ13045 1269 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 KSR2Q6VAB6 950 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 PI4KAP1Q8N8J0 262 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 PSMD1Q99460 953 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 MYH16Q9H6N6 1097 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 ZNF277Q9NRM2 450 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-202ENST00000400771 PSME4Q14997 1843 aa19.86■□□□□ 0.77
ATG4B-202ENST00000400771 GLTPD2A6NH11 291 aa19.85■□□□□ 0.77
ATG4B-202ENST00000400771 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
ATG4B-202ENST00000400771 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
ATG4B-202ENST00000400771 RTKN2Q8IZC4 609 aa19.85■□□□□ 0.77
ATG4B-202ENST00000400771 CCDC191Q8NCU4 936 aa19.85■□□□□ 0.77
ATG4B-202ENST00000400771 ZNF646O15015 1829 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-202ENST00000400771 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-202ENST00000400771 SF3B3Q15393 1217 aaKnown RBP19.84■□□□□ 0.77
ATG4B-202ENST00000400771 RTL5Q5HYW3 569 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-202ENST00000400771 ZBTB38Q8NAP3 1195 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-202ENST00000400771 ZNF541Q9H0D2 1346 aa19.83■□□□□ 0.77
ATG4B-202ENST00000400771 IRS4O14654 1257 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-202ENST00000400771 GRAPQ13588 217 aa19.83■□□□□ 0.77
ATG4B-202ENST00000400771 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.77
ATG4B-202ENST00000400771 GRAPLQ8TC17 118 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms