RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 SYNE4Q8N205 404 aa22.98■■□□□ 1.27
PDGFA-202ENST00000400761 TSKSQ9UJT2 592 aa22.98■■□□□ 1.27
PDGFA-202ENST00000400761 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
PDGFA-202ENST00000400761 SIPA1L3O60292 1781 aaPredicted RBP22.97■■□□□ 1.27
PDGFA-202ENST00000400761 NEFMP07197 916 aa22.97■■□□□ 1.27
PDGFA-202ENST00000400761 MCOLN1Q9GZU1 580 aa22.97■■□□□ 1.27
PDGFA-202ENST00000400761 CASP8AP2Q9UKL3 1982 aa22.97■■□□□ 1.27
PDGFA-202ENST00000400761 RUNDC1Q96C34 613 aa22.96■■□□□ 1.27
PDGFA-202ENST00000400761 CFAP44Q96MT7 982 aa22.96■■□□□ 1.27
PDGFA-202ENST00000400761 MAP2K2P36507 400 aa22.95■■□□□ 1.26
PDGFA-202ENST00000400761 TEFQ10587 303 aa22.95■■□□□ 1.26
PDGFA-202ENST00000400761 CST9Q5W186 159 aa22.95■■□□□ 1.26
PDGFA-202ENST00000400761 CLEC4GQ6UXB4 293 aa22.95■■□□□ 1.26
PDGFA-202ENST00000400761 TLL2Q9Y6L7 1015 aa22.95■■□□□ 1.26
PDGFA-202ENST00000400761 SNED1Q8TER0 1413 aa22.94■■□□□ 1.26
PDGFA-202ENST00000400761 GAS2L2Q8NHY3 880 aa22.94■■□□□ 1.26
PDGFA-202ENST00000400761 JDP2Q8WYK2 163 aa22.94■■□□□ 1.26
PDGFA-202ENST00000400761 FMNL2Q96PY5 1086 aa22.94■■□□□ 1.26
PDGFA-202ENST00000400761 AOC2O75106 756 aa22.93■■□□□ 1.26
PDGFA-202ENST00000400761 LMOD1P29536 600 aaPredicted RBP22.93■■□□□ 1.26
PDGFA-202ENST00000400761 IL17REQ8NFR9 667 aa22.93■■□□□ 1.26
PDGFA-202ENST00000400761 PSMD1Q99460 953 aa22.93■■□□□ 1.26
PDGFA-202ENST00000400761 GJA3Q9Y6H8 435 aa22.93■■□□□ 1.26
PDGFA-202ENST00000400761 TRAF5O00463 557 aa22.92■■□□□ 1.26
PDGFA-202ENST00000400761 CA12O43570 354 aa22.92■■□□□ 1.26
PDGFA-202ENST00000400761 ALDH1B1P30837 517 aa22.92■■□□□ 1.26
PDGFA-202ENST00000400761 EIF6P56537 245 aaKnown RBP22.92■■□□□ 1.26
PDGFA-202ENST00000400761 TPTE2Q6XPS3 522 aa22.92■■□□□ 1.26
PDGFA-202ENST00000400761 COL4A5P29400 1685 aa22.92■■□□□ 1.26
PDGFA-202ENST00000400761 EPS15P42566 896 aa22.91■■□□□ 1.26
PDGFA-202ENST00000400761 SCNN1DP51172 638 aa22.91■■□□□ 1.26
PDGFA-202ENST00000400761 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
PDGFA-202ENST00000400761 NFE2L2Q16236 605 aa22.9■■□□□ 1.26
PDGFA-202ENST00000400761 USP50Q70EL3 339 aaPredicted RBP22.9■■□□□ 1.26
PDGFA-202ENST00000400761 RRP7AQ9Y3A4 280 aaKnown RBP22.9■■□□□ 1.26
PDGFA-202ENST00000400761 APAF1O14727 1248 aa22.89■■□□□ 1.25
PDGFA-202ENST00000400761 PIP4K2AP48426 406 aaPredicted RBP22.89■■□□□ 1.25
PDGFA-202ENST00000400761 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
PDGFA-202ENST00000400761 TMPOP42166 694 aaKnown RBP22.88■■□□□ 1.25
PDGFA-202ENST00000400761 USP16Q9Y5T5 823 aa22.88■■□□□ 1.25
PDGFA-202ENST00000400761 DGKZQ13574 1117 aa22.87■■□□□ 1.25
PDGFA-202ENST00000400761 NEUROD2Q15784 382 aa22.87■■□□□ 1.25
PDGFA-202ENST00000400761 SAPCD2Q86UD0 394 aa22.87■■□□□ 1.25
PDGFA-202ENST00000400761 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
PDGFA-202ENST00000400761 RGL2O15211 777 aa22.86■■□□□ 1.25
PDGFA-202ENST00000400761 KCNQ3O43525 872 aa22.86■■□□□ 1.25
PDGFA-202ENST00000400761 BRPF1P55201 1214 aaPredicted RBP22.86■■□□□ 1.25
PDGFA-202ENST00000400761 FAM177BA6PVY3 158 aa22.85■■□□□ 1.25
PDGFA-202ENST00000400761 RIPK4P57078 832 aa22.85■■□□□ 1.25
PDGFA-202ENST00000400761 CC2D2BQ6DHV5 1058 aa22.85■■□□□ 1.25
PDGFA-202ENST00000400761 HHIPL1Q96JK4 782 aa22.84■■□□□ 1.25
PDGFA-202ENST00000400761 CEMIPQ8WUJ3 1361 aa22.84■■□□□ 1.25
PDGFA-202ENST00000400761 BTBD11A6QL63 1104 aa22.83■■□□□ 1.25
PDGFA-202ENST00000400761 CRY2Q49AN0 593 aa22.83■■□□□ 1.25
PDGFA-202ENST00000400761 LARGE2Q8N3Y3 721 aa22.83■■□□□ 1.25
PDGFA-202ENST00000400761 PRAMEF22A3QJZ6 481 aa22.82■■□□□ 1.24
PDGFA-202ENST00000400761 CELF2O95319 508 aaKnown RBP22.82■■□□□ 1.24
PDGFA-202ENST00000400761 DCTN1Q14203 1278 aa22.82■■□□□ 1.24
PDGFA-202ENST00000400761 RTF1Q92541 710 aaKnown RBP22.82■■□□□ 1.24
PDGFA-202ENST00000400761 GTF2E1P29083 439 aaPredicted RBP22.81■■□□□ 1.24
PDGFA-202ENST00000400761 MCM10Q7L590 875 aa22.81■■□□□ 1.24
PDGFA-202ENST00000400761 ADARB2Q9NS39 739 aaKnown RBP22.81■■□□□ 1.24
PDGFA-202ENST00000400761 GRIPAP1Q4V328 841 aa22.8■■□□□ 1.24
PDGFA-202ENST00000400761 CIAPIN1Q6FI81 312 aa22.8■■□□□ 1.24
PDGFA-202ENST00000400761 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
PDGFA-202ENST00000400761 ABCC12Q96J65 1359 aa22.79■■□□□ 1.24
PDGFA-202ENST00000400761 HTATSF1O43719 755 aaKnown RBP22.79■■□□□ 1.24
PDGFA-202ENST00000400761 THUMPD2Q9BTF0 503 aaKnown RBP22.79■■□□□ 1.24
PDGFA-202ENST00000400761 GPRC5DQ9NZD1 345 aa22.79■■□□□ 1.24
PDGFA-202ENST00000400761 TRIM35Q9UPQ4 493 aa22.79■■□□□ 1.24
PDGFA-202ENST00000400761 NBPF26B4DH59 902 aa22.78■■□□□ 1.24
PDGFA-202ENST00000400761 SNRPA1P09661 255 aaKnown RBP22.78■■□□□ 1.24
PDGFA-202ENST00000400761 LMOD3Q0VAK6 560 aa22.78■■□□□ 1.24
PDGFA-202ENST00000400761 HLFQ16534 295 aa22.78■■□□□ 1.24
PDGFA-202ENST00000400761 NBPF10Q6P3W6 841 aaKnown RBP22.78■■□□□ 1.24
PDGFA-202ENST00000400761 NBPF15Q8N660 670 aa22.78■■□□□ 1.24
PDGFA-202ENST00000400761 NIM1KQ8IY84 436 aa22.77■■□□□ 1.24
PDGFA-202ENST00000400761 GLIS2Q9BZE0 524 aaPredicted RBP22.77■■□□□ 1.24
PDGFA-202ENST00000400761 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
PDGFA-202ENST00000400761 PGAP2Q9UHJ9 254 aa22.76■■□□□ 1.23
PDGFA-202ENST00000400761 NOGQ13253 232 aa22.75■■□□□ 1.23
PDGFA-202ENST00000400761 SLC51AQ86UW1 340 aa22.75■■□□□ 1.23
PDGFA-202ENST00000400761 NUTM1Q86Y26 1132 aa22.75■■□□□ 1.23
PDGFA-202ENST00000400761 NYXQ9GZU5 481 aa22.75■■□□□ 1.23
PDGFA-202ENST00000400761 SOX10P56693 466 aa22.74■■□□□ 1.23
PDGFA-202ENST00000400761 RPGRQ92834 1020 aaKnown RBP22.74■■□□□ 1.23
PDGFA-202ENST00000400761 ZIC5Q96T25 663 aa22.74■■□□□ 1.23
PDGFA-202ENST00000400761 ZNF408Q9H9D4 720 aa22.74■■□□□ 1.23
PDGFA-202ENST00000400761 RIC1Q4ADV7 1423 aa22.74■■□□□ 1.23
PDGFA-202ENST00000400761 PPIP5K2O43314 1243 aa22.73■■□□□ 1.23
PDGFA-202ENST00000400761 PRPF38BQ5VTL8 546 aaKnown RBP22.73■■□□□ 1.23
PDGFA-202ENST00000400761 AOC3Q16853 763 aa22.72■■□□□ 1.23
PDGFA-202ENST00000400761 CRAMP1Q96RY5 1269 aa22.72■■□□□ 1.23
PDGFA-202ENST00000400761 NUP98P52948 1817 aa22.72■■□□□ 1.23
PDGFA-202ENST00000400761 PPEF1O14829 653 aaPredicted RBP22.71■■□□□ 1.23
PDGFA-202ENST00000400761 GMPSP49915 693 aaPredicted RBP22.71■■□□□ 1.23
PDGFA-202ENST00000400761 CXCL9Q07325 125 aa22.71■■□□□ 1.23
PDGFA-202ENST00000400761 CCDC27Q2M243 656 aa22.71■■□□□ 1.23
PDGFA-202ENST00000400761 ZC3H15Q8WU90 426 aaKnown RBP22.71■■□□□ 1.23
PDGFA-202ENST00000400761 VPS33BQ9H267 617 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms