RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 FAM196BA6NMK8 535 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 MAFGO15525 162 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 PADI6Q6TGC4 694 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 BRINP3Q76B58 766 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 ARMC5Q96C12 935 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 PCGF6Q9BYE7 350 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 STK26Q9P289 416 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 USP32Q8NFA0 1604 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 SETQ01105 290 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 NEUROD1Q13562 356 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 HSP90AB2PQ58FF8 381 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 SMC5Q8IY18 1101 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 PMM1Q92871 262 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 SGSM3Q96HU1 749 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 PRAM1Q96QH2 718 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 CCSER2Q9H7U1 834 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 NLRP2Q9NX02 1062 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 GABBR1Q9UBS5 961 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 DCTN4Q9UJW0 460 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 ITSN1Q15811 1721 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 GPRASP1Q5JY77 1395 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TNNI2P48788 182 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 RALBP1Q15311 655 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 NBPF1Q3BBV0 1214 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZNF746Q6NUN9 644 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TMEM87AQ8NBN3 555 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 BRINP2Q9C0B6 783 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TGIF2Q9GZN2 237 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ACBD3Q9H3P7 528 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZBTB3Q9H5J0 574 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 EGFL7Q9UHF1 273 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TRAK1Q9UPV9 953 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ANKARQ7Z5J8 1434 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TOPAZ1Q8N9V7 1692 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 GFRA3O60609 400 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 ICMTO60725 284 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 DNAJA1P31689 397 aaKnown RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 RBL2Q08999 1139 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 PTK7Q13308 1070 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 FOXD4L6Q3SYB3 417 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 PPP1R18Q6NYC8 613 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 FOXD4L3Q6VB84 417 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 GLYCTKQ8IVS8 523 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZSCAN29Q8IWY8 852 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 ANKK1Q8NFD2 765 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 POGKQ9P215 609 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 MED1Q15648 1581 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 TONSLQ96HA7 1378 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 TULP4Q9NRJ4 1543 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 RALGAPBQ86X10 1494 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 COL22A1Q8NFW1 1626 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 USP17L5A8MUK1 530 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 U2SURPO15042 1029 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 SKIP12755 728 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 EIF4G2P78344 907 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 KCNC4Q03721 635 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 BMS1Q14692 1282 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 ECM1Q16610 540 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 NBPF8Q3BBV2 869 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 PLEKHG6Q3KR16 790 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZCRB1Q8TBF4 217 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 ORAI2Q96SN7 254 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 PLCD4Q9BRC7 762 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 TERF2IPQ9NYB0 399 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 EIF3AQ14152 1382 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 JCADQ9P266 1359 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 PXDNQ92626 1479 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 SOS2Q07890 1332 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 MARF1Q9Y4F3 1742 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 WASLO00401 505 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 CREB3O43889 395 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 P4HBP07237 508 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 RASA1P20936 1047 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 FANCCQ00597 558 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 LARP1Q6PKG0 1096 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 C1orf216Q8TAB5 229 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 FAM161BQ96MY7 647 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 GMLQ99445 158 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 EPAS1Q99814 870 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 ROCK2O75116 1388 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 TRPM3Q9HCF6 1732 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P7-201ENST00000400214 SPATA31A6Q5VVP1 1343 aa7.04□□□□□ -1.28
HMGB3P7-201ENST00000400214 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
HMGB3P7-201ENST00000400214 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms