RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
GABPA-202ENST00000400075 CCDC24Q8N4L8 307 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 GGA1Q9UJY5 639 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 ZFYVE27Q5T4F4 411 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 ZSCAN31Q96LW9 406 aaPredicted RBP16.9■□□□□ 0.3
GABPA-202ENST00000400075 LARP1BQ659C4 914 aaKnown RBP16.9■□□□□ 0.3
GABPA-202ENST00000400075 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
GABPA-202ENST00000400075 NIM1KQ8IY84 436 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 PZPP20742 1482 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 PPP4R3AQ6IN85 833 aa16.9■□□□□ 0.3
GABPA-202ENST00000400075 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
GABPA-202ENST00000400075 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
GABPA-202ENST00000400075 AFF2P51816 1311 aa16.89■□□□□ 0.3
GABPA-202ENST00000400075 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
GABPA-202ENST00000400075 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
GABPA-202ENST00000400075 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 MEIS3Q99687 375 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
GABPA-202ENST00000400075 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
GABPA-202ENST00000400075 TRAF1Q13077 416 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 MFSD6Q6ZSS7 791 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 VAT1LQ9HCJ6 419 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 KIF5BP33176 963 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 VTI1AQ96AJ9 217 aa16.89■□□□□ 0.29
GABPA-202ENST00000400075 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
GABPA-202ENST00000400075 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
GABPA-202ENST00000400075 CASTP20810 708 aaKnown RBP16.88■□□□□ 0.29
GABPA-202ENST00000400075 IL13P35225 146 aa16.88■□□□□ 0.29
GABPA-202ENST00000400075 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
GABPA-202ENST00000400075 KRT24Q2M2I5 525 aa16.88■□□□□ 0.29
GABPA-202ENST00000400075 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
GABPA-202ENST00000400075 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
GABPA-202ENST00000400075 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
GABPA-202ENST00000400075 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 SIK1P57059 783 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 NAP1L5Q96NT1 182 aaPredicted RBP16.87■□□□□ 0.29
GABPA-202ENST00000400075 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
GABPA-202ENST00000400075 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 ME1P48163 572 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
GABPA-202ENST00000400075 FAM13BQ9NYF5 915 aa16.87■□□□□ 0.29
GABPA-202ENST00000400075 H7C1D1 291 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 PDE8AO60658 829 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
GABPA-202ENST00000400075 SLC9C2Q5TAH2 1124 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
GABPA-202ENST00000400075 STIM1Q13586 685 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 PPIP5K2O43314 1243 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
GABPA-202ENST00000400075 FIBPO43427 364 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 HOXB7P09629 217 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 ARHGEF25Q86VW2 580 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
GABPA-202ENST00000400075 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 PHKG2P15735 406 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 HAND2P61296 217 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 SYCP1Q15431 976 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 MPNDQ8N594 471 aa16.85■□□□□ 0.29
GABPA-202ENST00000400075 CCDC12Q8WUD4 166 aaPredicted RBP16.85■□□□□ 0.29
GABPA-202ENST00000400075 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
GABPA-202ENST00000400075 WDR17Q8IZU2 1322 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
GABPA-202ENST00000400075 NAP1L1P55209 391 aaKnown RBP16.84■□□□□ 0.29
GABPA-202ENST00000400075 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 B4DLN1 442 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 MRPL12P52815 198 aaKnown RBP16.84■□□□□ 0.29
GABPA-202ENST00000400075 RAB34Q9BZG1 259 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 ARHGEF5Q12774 1597 aa16.84■□□□□ 0.29
GABPA-202ENST00000400075 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.29
GABPA-202ENST00000400075 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.29
GABPA-202ENST00000400075 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.29
GABPA-202ENST00000400075 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.29
GABPA-202ENST00000400075 HOOK2Q96ED9 719 aa16.83■□□□□ 0.28
GABPA-202ENST00000400075 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
GABPA-202ENST00000400075 PLS1Q14651 629 aa16.83■□□□□ 0.28
GABPA-202ENST00000400075 ROBO2Q9HCK4 1378 aa16.83■□□□□ 0.28
GABPA-202ENST00000400075 ITGA6P23229 1130 aa16.82■□□□□ 0.28
GABPA-202ENST00000400075 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
GABPA-202ENST00000400075 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms