RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PCYT1AP49585 367 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 NONOQ15233 471 aaKnown RBP eCLIP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 MCUR1Q96AQ8 359 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 CDC45O75419 566 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 SCHIP1Q9P0W5 487 aaPredicted RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 FOSBP53539 338 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 VPS41P49754 854 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 RNF10Q8N5U6 811 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 PPP1R12CQ9BZL4 782 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 RRP7BPQ9NSQ0 103 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 KRT3P12035 628 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 AMPHP49418 695 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 PALMDQ9NP74 551 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 CLUL1Q15846 466 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC125Q86Z20 511 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 NRBF2Q96F24 287 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 CEP162Q5TB80 1403 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 NUCB1Q02818 461 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 API5Q9BZZ5 524 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 NUB1Q9Y5A7 615 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 BANK1Q8NDB2 785 aa9.77□□□□□ -0.84
CACNA1C-220ENST00000399655 UTP14AQ9BVJ6 771 aaKnown RBP9.77□□□□□ -0.84
CACNA1C-220ENST00000399655 FIBPO43427 364 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 SKOR1P84550 965 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 BZW2Q9Y6E2 419 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 MSH5O43196 834 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 ATP6V1E2Q96A05 226 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 ORC6Q9Y5N6 252 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 HNRNPCL2B2RXH8 293 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 HNRNPCL1O60812 293 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 PRIMPOLQ96LW4 560 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 SEC63Q9UGP8 760 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 KCNA4P22459 653 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 CTCFLQ8NI51 663 aaPredicted RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 PLCB1Q9NQ66 1216 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 TEFQ10587 303 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 RSPH14Q9UHP6 348 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 NUTM1Q86Y26 1132 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 HDAC9Q9UKV0 1011 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 MAFGO15525 162 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 ZSCAN25Q6NSZ9 544 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 CROCCP2Q86T23 111 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 ZC3H15Q8WU90 426 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 NUP62CLQ9H1M0 184 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 MMRN2Q9H8L6 949 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 FAM8A1Q9UBU6 413 aa9.77□□□□□ -0.85
CACNA1C-220ENST00000399655 KLHDC4Q8TBB5 520 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 SENP3Q9H4L4 574 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 WDR70Q9NW82 654 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 SLC38A10Q9HBR0 1119 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 RAB11FIP3O75154 756 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 KHDRBS2Q5VWX1 349 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 TTC19Q6DKK2 380 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 KRT8P05787 483 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 PDCLQ13371 301 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 AMOTQ4VCS5 1084 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 GKAP1Q5VSY0 366 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 GRPEL1Q9HAV7 217 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 NKIRAS1Q9NYS0 192 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 MAP3K11Q16584 847 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 TMEM266Q2M3C6 531 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 GPR161Q8N6U8 529 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 FLOT2Q14254 428 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 HAUS7Q99871 368 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 PRDM1O75626 825 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 BRD2P25440 801 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 MTRF1LQ9UGC7 380 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 HSPA8P11142 646 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 UBE2Q2Q8WVN8 375 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 MICAL3Q7RTP6 2002 aa9.76□□□□□ -0.85
CACNA1C-220ENST00000399655 SLC8A1P32418 973 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 BAG5Q9UL15 447 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 LMBR1Q8WVP7 490 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 HSPA1LP34931 641 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 EVI5LQ96CN4 794 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 BAG1Q99933 345 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 PRPF4BQ13523 1007 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 PALM2Q8IXS6 379 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 DIXDC1Q155Q3 683 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 GOLGA8QA0A0J9YX86 632 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 GOLGA8OA6NCC3 632 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 GOLGA8NF8WBI6 632 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 MAP2K2P36507 400 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 DDX42Q86XP3 938 aaKnown RBP eCLIP9.75□□□□□ -0.85
CACNA1C-220ENST00000399655 ESRRGP62508 458 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 IWS1Q96ST2 819 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 MCM10Q7L590 875 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms