RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CUL7Q14999 1698 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 PPP1R12AO14974 1030 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 GNPATO15228 680 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 KIF4AO95239 1232 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 PRDM10Q9NQV6 1147 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 DHX29Q7Z478 1369 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 MBD3O95983 291 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC12Q8WUD4 166 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
CACNA1C-216ENST00000399638 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 H0YIN7 160 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 STX6O43752 255 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC178Q5BJE1 867 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 FKBP15Q5T1M5 1219 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 RNF187Q5TA31 235 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 DAPK1P53355 1430 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 M0QZ92 97 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 FAM184BQ9ULE4 1060 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 ZNF213O14771 459 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
CACNA1C-216ENST00000399638 CALM1P0DP23 149 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 CALM2P0DP24 149 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 CALM3P0DP25 149 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 USP21Q9UK80 565 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 MCM2P49736 904 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 RAB3IL1Q8TBN0 382 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 NDC80O14777 642 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 CCP110O43303 1012 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
CACNA1C-216ENST00000399638 BACH1O14867 736 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 PDZRN3Q9UPQ7 1066 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 KIF5BP33176 963 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 ARID5AQ03989 594 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 HAUS7Q99871 368 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 MCM5P33992 734 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
CACNA1C-216ENST00000399638 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 GOLGA8AA7E2F4 631 aa12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 GNL1P36915 607 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 H7C1D1 291 aa12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 CCDC66A2RUB6 948 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms