RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 HSP90B2PQ58FF3 399 aa16.04■□□□□ 0.16
CACNA1C-211ENST00000399617 BIN1O00499 593 aa16.04■□□□□ 0.16
CACNA1C-211ENST00000399617 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
CACNA1C-211ENST00000399617 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-211ENST00000399617 GSTO1P78417 241 aa16.04■□□□□ 0.16
CACNA1C-211ENST00000399617 TSG101Q99816 390 aa16.04■□□□□ 0.16
CACNA1C-211ENST00000399617 MCM2P49736 904 aa16.03■□□□□ 0.16
CACNA1C-211ENST00000399617 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-211ENST00000399617 RGS22Q8NE09 1264 aa16.03■□□□□ 0.16
CACNA1C-211ENST00000399617 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-211ENST00000399617 UFL1O94874 794 aa16.03■□□□□ 0.16
CACNA1C-211ENST00000399617 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
CACNA1C-211ENST00000399617 SORBS3O60504 671 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 PRIM1P49642 420 aaKnown RBP16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 PLCD4Q9BRC7 762 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 PRC1O43663 620 aa16.02■□□□□ 0.16
CACNA1C-211ENST00000399617 TFIP11Q9UBB9 837 aaKnown RBP16.02■□□□□ 0.15
CACNA1C-211ENST00000399617 TCP10Q12799 353 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 CFAP100Q494V2 611 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 MPHOSPH6Q99547 160 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 ERLIN2O94905 339 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 MAGEB6Q8N7X4 407 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 ARGLU1Q9NWB6 273 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-211ENST00000399617 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
CACNA1C-211ENST00000399617 LARGE2Q8N3Y3 721 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 ZKSCAN3Q9BRR0 538 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
CACNA1C-211ENST00000399617 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
CACNA1C-211ENST00000399617 TEX35Q5T0J7 233 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
CACNA1C-211ENST00000399617 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 NUP62CLQ9H1M0 184 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 LETM1O95202 739 aaPredicted RBP16■□□□□ 0.15
CACNA1C-211ENST00000399617 GCP02774 474 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 PRKCSHP14314 528 aaPredicted RBP16■□□□□ 0.15
CACNA1C-211ENST00000399617 MCM9Q9NXL9 1143 aa16■□□□□ 0.15
CACNA1C-211ENST00000399617 MAGEB6P1A0A0J9YX57 407 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 ZSCAN31Q96LW9 406 aaPredicted RBP15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 RXRAP19793 462 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 CFAP45Q9UL16 551 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 METAP2P50579 478 aaKnown RBP eCLIP15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 CCDC178Q5BJE1 867 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 GDPD2Q9HCC8 539 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 RARSP54136 660 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 HSP90AA4PQ58FG1 418 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 MAP7D2Q96T17 732 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 GOPCQ9HD26 462 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 SLC9C2Q5TAH2 1124 aa15.99■□□□□ 0.15
CACNA1C-211ENST00000399617 TDRD12Q587J7 1177 aaKnown RBP15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 NOD1Q9Y239 953 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 TCHPQ9BT92 498 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 BAG6P46379 1132 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 PLIN2Q99541 437 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 HARSP12081 509 aaKnown RBP15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 PROCA1Q8NCQ7 364 aaPredicted RBP15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 ACBD3Q9H3P7 528 aa15.98■□□□□ 0.15
CACNA1C-211ENST00000399617 DNAI2Q9GZS0 605 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 CCDC40Q4G0X9 1142 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 NECAB1Q8N987 351 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 TAF4BQ92750 862 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 CALML4Q96GE6 196 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 LUC7LQ9NQ29 371 aaKnown RBP15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 H0YIN7 160 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 RFX1P22670 979 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 CTNNA2P26232 953 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 KCNQ4P56696 695 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 TAF12Q16514 161 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 TIAM1Q13009 1591 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 GJC1P36383 396 aa15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
CACNA1C-211ENST00000399617 KIF5BP33176 963 aa15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 PHACTR2O75167 634 aa15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 TAF5LO75529 589 aa15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 CT47B1P0C2W7 299 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 AAMPQ13685 434 aa15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 WTAPQ15007 396 aa15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 GPCPD1Q9NPB8 672 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms