RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 FERP16591 822 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 MCM4P33991 863 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 NACA2Q9H009 215 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 CUL7Q14999 1698 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CACNA1C-210ENST00000399606 PPP1R12AO14974 1030 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 SHTN1A0MZ66 631 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 GNPATO15228 680 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 KIF4AO95239 1232 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 PRDM10Q9NQV6 1147 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 DHX29Q7Z478 1369 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 MCM2P49736 904 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC12Q8WUD4 166 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
CACNA1C-210ENST00000399606 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 H0YIN7 160 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 STX6O43752 255 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC178Q5BJE1 867 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 FKBP15Q5T1M5 1219 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 RNF187Q5TA31 235 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 DAPK1P53355 1430 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 M0QZ92 97 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 FAM184BQ9ULE4 1060 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 ZNF213O14771 459 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
CACNA1C-210ENST00000399606 CALM1P0DP23 149 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 CALM2P0DP24 149 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 CALM3P0DP25 149 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 USP21Q9UK80 565 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 RAB3IL1Q8TBN0 382 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 NDC80O14777 642 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
CACNA1C-210ENST00000399606 BACH1O14867 736 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 KIF5BP33176 963 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 ARID5AQ03989 594 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 HAUS7Q99871 368 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 MCM5P33992 734 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
CACNA1C-210ENST00000399606 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms