RNA–Protein interactions for RNA: ENST00000399597.5

CACNA1C-207, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-207ENST00000399597 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-207ENST00000399597 APBA3O96018 575 aa12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 PRR16Q569H4 304 aa12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 TSG101Q99816 390 aa12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 TNNI2P48788 182 aa12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 UPF3BQ9BZI7 483 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 MKRN1Q9UHC7 482 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-207ENST00000399597 RANBP6O60518 1105 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 BICD1Q96G01 975 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 PRKAG2Q9UGJ0 569 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 SREK1Q8WXA9 508 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 KCNA4P22459 653 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 CUL4BQ13620 913 aa12.76□□□□□ -0.37
CACNA1C-207ENST00000399597 SNX16P57768 344 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 RASA3Q14644 834 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 ARHGEF6Q15052 776 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 TCERG1LQ5VWI1 586 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 MRRFQ96E11 262 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 CDKL5O76039 1030 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-207ENST00000399597 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 ATICP31939 592 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 GSTO1P78417 241 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 ISM2Q6H9L7 571 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 BAG4O95429 457 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
CACNA1C-207ENST00000399597 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 SPATA32Q96LK8 384 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 MAP9Q49MG5 647 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 WAPLQ7Z5K2 1190 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 PICALMQ13492 652 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 CEP112Q8N8E3 955 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 CCT6BQ92526 530 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 CDC45O75419 566 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 GMNNO75496 209 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 GUCY1B3Q02153 619 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 NAA16Q6N069 864 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
CACNA1C-207ENST00000399597 PRKG1Q13976 671 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 EYA3Q99504 573 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 NAPBQ9H115 298 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 HSPA4P34932 840 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 CFAP157Q5JU67 520 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 NLRP5P59047 1200 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 SF3A3Q12874 501 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 SYCP3Q8IZU3 236 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 SFMBT1Q9UHJ3 866 aa12.72□□□□□ -0.37
CACNA1C-207ENST00000399597 WASF1Q92558 559 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 RABGAP1Q9Y3P9 1069 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 ACRBPQ8NEB7 543 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 FERMT1Q9BQL6 677 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 NYXQ9GZU5 481 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 KRT13P13646 458 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 ACTN2P35609 894 aa12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-207ENST00000399597 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms