RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 COL15A1P39059 1388 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
PTPN6-202ENST00000399448 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
PTPN6-202ENST00000399448 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
PTPN6-202ENST00000399448 BOLA2Q9H3K6 86 aa16.47■□□□□ 0.23
PTPN6-202ENST00000399448 PDRG1Q9NUG6 133 aa16.47■□□□□ 0.23
PTPN6-202ENST00000399448 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
PTPN6-202ENST00000399448 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-202ENST00000399448 RABL6Q3YEC7 729 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-202ENST00000399448 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
PTPN6-202ENST00000399448 ZSCAN31Q96LW9 406 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-202ENST00000399448 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
PTPN6-202ENST00000399448 TMEM63CQ9P1W3 806 aa16.46■□□□□ 0.23
PTPN6-202ENST00000399448 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
PTPN6-202ENST00000399448 CLCN1P35523 988 aa16.45■□□□□ 0.22
PTPN6-202ENST00000399448 RFX5P48382 616 aaPredicted RBP16.45■□□□□ 0.22
PTPN6-202ENST00000399448 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
PTPN6-202ENST00000399448 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
PTPN6-202ENST00000399448 NSFL1CQ9UNZ2 370 aaKnown RBP16.45■□□□□ 0.22
PTPN6-202ENST00000399448 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
PTPN6-202ENST00000399448 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
PTPN6-202ENST00000399448 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
PTPN6-202ENST00000399448 FSD1Q9BTV5 496 aa16.45■□□□□ 0.22
PTPN6-202ENST00000399448 RBM8AQ9Y5S9 174 aaKnown RBP16.45■□□□□ 0.22
PTPN6-202ENST00000399448 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
PTPN6-202ENST00000399448 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
PTPN6-202ENST00000399448 CPA1P15085 419 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
PTPN6-202ENST00000399448 CREB3L3Q68CJ9 461 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 LRSAM1Q6UWE0 723 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 RBSNQ9H1K0 784 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
PTPN6-202ENST00000399448 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 ESPNB1AK53 854 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 KCNJ4P48050 445 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
PTPN6-202ENST00000399448 A0A087WZG4 1122 aa16.43■□□□□ 0.22
PTPN6-202ENST00000399448 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
PTPN6-202ENST00000399448 ATP5JP18859 108 aa16.43■□□□□ 0.22
PTPN6-202ENST00000399448 JARID2Q92833 1246 aaPredicted RBP16.43■□□□□ 0.22
PTPN6-202ENST00000399448 LARP6Q9BRS8 491 aaKnown RBP16.43■□□□□ 0.22
PTPN6-202ENST00000399448 PSMA5P28066 241 aa16.43■□□□□ 0.22
PTPN6-202ENST00000399448 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
PTPN6-202ENST00000399448 SYAP1Q96A49 352 aaPredicted RBP16.43■□□□□ 0.22
PTPN6-202ENST00000399448 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
PTPN6-202ENST00000399448 A0A0D9SFI3 127 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 ATP5J2-PTCD1G3V325 749 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 STX6O43752 255 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
PTPN6-202ENST00000399448 SYT1P21579 422 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 CASP7P55210 303 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 RNF20Q5VTR2 975 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 USP48Q86UV5 1035 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 TMEM87AQ8NBN3 555 aa16.42■□□□□ 0.22
PTPN6-202ENST00000399448 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
PTPN6-202ENST00000399448 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
PTPN6-202ENST00000399448 WDR17Q8IZU2 1322 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 SYCE3A1L190 88 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 SLC27A2O14975 620 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 TFCP2Q12800 502 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 BRINP3Q76B58 766 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 ERVV-2B6SEH9 535 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 LARGE1O95461 756 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 DBNLQ9UJU6 430 aaKnown RBP16.41■□□□□ 0.22
PTPN6-202ENST00000399448 AFDNP55196 1824 aaKnown RBP16.41■□□□□ 0.22
PTPN6-202ENST00000399448 LAMB4A4D0S4 1761 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
PTPN6-202ENST00000399448 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 NBPF14Q5TI25 921 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
PTPN6-202ENST00000399448 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 CCDC83Q8IWF9 413 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 H7C1W4 665 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 FOXD4L6Q3SYB3 417 aaPredicted RBP16.4■□□□□ 0.22
PTPN6-202ENST00000399448 FOXD4L3Q6VB84 417 aaPredicted RBP16.4■□□□□ 0.22
PTPN6-202ENST00000399448 GLI3P10071 1580 aa16.4■□□□□ 0.22
PTPN6-202ENST00000399448 F13A1P00488 732 aa16.39■□□□□ 0.21
PTPN6-202ENST00000399448 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
PTPN6-202ENST00000399448 TSGA10IPQ3SY00 556 aa16.39■□□□□ 0.21
PTPN6-202ENST00000399448 ALDH8A1Q9H2A2 487 aaPredicted RBP16.39■□□□□ 0.21
PTPN6-202ENST00000399448 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
PTPN6-202ENST00000399448 JCADQ9P266 1359 aa16.39■□□□□ 0.21
PTPN6-202ENST00000399448 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
PTPN6-202ENST00000399448 GJB2P29033 226 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 ME3Q16798 604 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 PHF14O94880 888 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
PTPN6-202ENST00000399448 FOXO4P98177 505 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
PTPN6-202ENST00000399448 TAF5LO75529 589 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms