RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 ZNF830Q96NB3 372 aaPredicted RBP17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 CYP46A1Q9Y6A2 500 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 RUFY2Q8WXA3 655 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 ERBB3P21860 1342 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 OFD1O75665 1012 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 NEURL1BA8MQ27 555 aa17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 GIMAP6Q6P9H5 292 aa17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 GPATCH3Q96I76 525 aa17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 R3HCC1Q9Y3T6 440 aaKnown RBP17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
CCDC144A-205ENST00000399264 SLC27A2O14975 620 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 MAP4K1Q92918 833 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 USP25Q9UHP3 1055 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 STK3Q13188 491 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 GCKRQ14397 625 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
CCDC144A-205ENST00000399264 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
CCDC144A-205ENST00000399264 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
CCDC144A-205ENST00000399264 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
CCDC144A-205ENST00000399264 SEC62Q99442 399 aaKnown RBP17.4■□□□□ 0.38
CCDC144A-205ENST00000399264 CHMP4AQ9BY43 222 aa17.4■□□□□ 0.38
CCDC144A-205ENST00000399264 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
CCDC144A-205ENST00000399264 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.38
CCDC144A-205ENST00000399264 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.38
CCDC144A-205ENST00000399264 UTYO14607 1347 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 KCNB2Q92953 911 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 NCAPD2Q15021 1401 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
CCDC144A-205ENST00000399264 COL15A1P39059 1388 aa17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 PHKG2P15735 406 aa17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 TFCP2Q12800 502 aa17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 UBE2HP62256 183 aa17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 CCDC183Q5T5S1 534 aa17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 C17orf53Q8N3J3 647 aaPredicted RBP17.38■□□□□ 0.37
CCDC144A-205ENST00000399264 CYP27B1O15528 508 aa17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 ANKRD13DQ6ZTN6 518 aa17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 LRP10Q7Z4F1 713 aa17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 CSB-PGBD3P0DP91 1061 aa17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 METTL22Q9BUU2 404 aaPredicted RBP17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCDC144A-205ENST00000399264 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 LARP1BQ659C4 914 aaKnown RBP17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 SLIT3O75094 1523 aa17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 NPHP4O75161 1426 aaPredicted RBP17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 AP5Z1O43299 807 aa17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 PTPN12Q05209 780 aaKnown RBP17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 TFIP11Q9UBB9 837 aaKnown RBP17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 C5P01031 1676 aa17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
CCDC144A-205ENST00000399264 MEGF6O75095 1541 aa17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 TOB2Q14106 344 aaPredicted RBP17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 HSP90AA2PQ14568 343 aaPredicted RBP17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 DBNDD2Q9BQY9 259 aa17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 SIPA1L3O60292 1781 aaPredicted RBP17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 PPFIA3O75145 1194 aa17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 TTC6Q86TZ1 520 aa17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
CCDC144A-205ENST00000399264 CAMK4Q16566 473 aa17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 TAF5LO75529 589 aa17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 ADCY5O95622 1261 aa17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 DDX46Q7L014 1031 aaKnown RBP17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 JAK2O60674 1132 aa17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 PHF14O94880 888 aa17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 ZSCAN31Q96LW9 406 aaPredicted RBP17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 SH2B1Q9NRF2 756 aaPredicted RBP17.34■□□□□ 0.37
CCDC144A-205ENST00000399264 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 DDX11Q96FC9 970 aa17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 A0A087WZG4 1122 aa17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 LIG1P18858 919 aa17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 TNNI3KQ59H18 835 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms