RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 ADCY9O60503 1353 aa17.98■□□□□ 0.47
TUBA4A-203ENST00000398989 CCDC88AQ3V6T2 1871 aa17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 PRPF40BQ6NWY9 871 aaKnown RBP17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 STK31Q9BXU1 1019 aa17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 MYH16Q9H6N6 1097 aa17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 RIC1Q4ADV7 1423 aa17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 CACNA1FO60840 1977 aa17.97■□□□□ 0.47
TUBA4A-203ENST00000398989 C21orf2O43822 256 aa17.96■□□□□ 0.47
TUBA4A-203ENST00000398989 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
TUBA4A-203ENST00000398989 ZNF428Q96B54 188 aa17.96■□□□□ 0.47
TUBA4A-203ENST00000398989 FER1L6Q2WGJ9 1857 aa17.96■□□□□ 0.47
TUBA4A-203ENST00000398989 LAMB2P55268 1798 aa17.96■□□□□ 0.47
TUBA4A-203ENST00000398989 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
TUBA4A-203ENST00000398989 ATP5J2-PTCD1G3V325 749 aa17.95■□□□□ 0.46
TUBA4A-203ENST00000398989 RASSF7Q02833 373 aa17.95■□□□□ 0.46
TUBA4A-203ENST00000398989 CRY2Q49AN0 593 aa17.95■□□□□ 0.46
TUBA4A-203ENST00000398989 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
TUBA4A-203ENST00000398989 RNF123Q5XPI4 1314 aa17.95■□□□□ 0.46
TUBA4A-203ENST00000398989 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
TUBA4A-203ENST00000398989 C9orf131Q5VYM1 1079 aa17.94■□□□□ 0.46
TUBA4A-203ENST00000398989 MIER1Q8N108 512 aa17.94■□□□□ 0.46
TUBA4A-203ENST00000398989 ISCA1Q9BUE6 129 aa17.94■□□□□ 0.46
TUBA4A-203ENST00000398989 DDX60Q8IY21 1712 aaKnown RBP17.93■□□□□ 0.46
TUBA4A-203ENST00000398989 VAMP4O75379 141 aa17.93■□□□□ 0.46
TUBA4A-203ENST00000398989 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
TUBA4A-203ENST00000398989 RPGRQ92834 1020 aaKnown RBP17.93■□□□□ 0.46
TUBA4A-203ENST00000398989 RNF181Q9P0P0 153 aa17.93■□□□□ 0.46
TUBA4A-203ENST00000398989 ALDH1B1P30837 517 aa17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 ZNF526Q8TF50 670 aaPredicted RBP17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
TUBA4A-203ENST00000398989 NFKBIEO00221 500 aa17.91■□□□□ 0.46
TUBA4A-203ENST00000398989 HCLS1P14317 486 aaPredicted RBP17.91■□□□□ 0.46
TUBA4A-203ENST00000398989 G2E3Q7L622 706 aa17.91■□□□□ 0.46
TUBA4A-203ENST00000398989 MYD88Q99836 296 aa17.91■□□□□ 0.46
TUBA4A-203ENST00000398989 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
TUBA4A-203ENST00000398989 TRIM28Q13263 835 aaKnown RBP17.9■□□□□ 0.46
TUBA4A-203ENST00000398989 SOGA3Q5TF21 947 aa17.9■□□□□ 0.46
TUBA4A-203ENST00000398989 KSR2Q6VAB6 950 aa17.9■□□□□ 0.46
TUBA4A-203ENST00000398989 RBM17Q96I25 401 aaKnown RBP17.9■□□□□ 0.46
TUBA4A-203ENST00000398989 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
TUBA4A-203ENST00000398989 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 LMNB1P20700 586 aa17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 HOXA10P31260 410 aaPredicted RBP17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 FAM89AQ96GI7 184 aa17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
TUBA4A-203ENST00000398989 PRELPP51888 382 aa17.88■□□□□ 0.45
TUBA4A-203ENST00000398989 FLIIQ13045 1269 aa17.88■□□□□ 0.45
TUBA4A-203ENST00000398989 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
TUBA4A-203ENST00000398989 OLFM4Q6UX06 510 aa17.88■□□□□ 0.45
TUBA4A-203ENST00000398989 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
TUBA4A-203ENST00000398989 TAF1P21675 1872 aa17.88■□□□□ 0.45
TUBA4A-203ENST00000398989 E9PSI1 815 aa17.87■□□□□ 0.45
TUBA4A-203ENST00000398989 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
TUBA4A-203ENST00000398989 NEXNQ0ZGT2 675 aa17.86■□□□□ 0.45
TUBA4A-203ENST00000398989 FKBP5Q13451 457 aaPredicted RBP17.86■□□□□ 0.45
TUBA4A-203ENST00000398989 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
TUBA4A-203ENST00000398989 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
TUBA4A-203ENST00000398989 LTBP3Q9NS15 1303 aa17.86■□□□□ 0.45
TUBA4A-203ENST00000398989 PPEF1O14829 653 aaPredicted RBP17.85■□□□□ 0.45
TUBA4A-203ENST00000398989 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
TUBA4A-203ENST00000398989 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
TUBA4A-203ENST00000398989 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
TUBA4A-203ENST00000398989 ABCC4O15439 1325 aa17.84■□□□□ 0.45
TUBA4A-203ENST00000398989 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
TUBA4A-203ENST00000398989 IGKV5-2P06315 115 aa17.84■□□□□ 0.45
TUBA4A-203ENST00000398989 DDX46Q7L014 1031 aaKnown RBP17.84■□□□□ 0.45
TUBA4A-203ENST00000398989 RTKN2Q8IZC4 609 aa17.84■□□□□ 0.45
TUBA4A-203ENST00000398989 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
TUBA4A-203ENST00000398989 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
TUBA4A-203ENST00000398989 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.44
TUBA4A-203ENST00000398989 SLC51AQ86UW1 340 aa17.83■□□□□ 0.44
TUBA4A-203ENST00000398989 JARID2Q92833 1246 aaPredicted RBP17.83■□□□□ 0.44
TUBA4A-203ENST00000398989 MYH3P11055 1940 aa17.82■□□□□ 0.44
TUBA4A-203ENST00000398989 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
TUBA4A-203ENST00000398989 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
TUBA4A-203ENST00000398989 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
TUBA4A-203ENST00000398989 NEURL1BA8MQ27 555 aa17.81■□□□□ 0.44
TUBA4A-203ENST00000398989 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
TUBA4A-203ENST00000398989 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
TUBA4A-203ENST00000398989 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
TUBA4A-203ENST00000398989 ZNF277Q9NRM2 450 aaPredicted RBP17.81■□□□□ 0.44
TUBA4A-203ENST00000398989 KDM2BQ8NHM5 1336 aa17.8■□□□□ 0.44
TUBA4A-203ENST00000398989 BBOX1O75936 387 aa17.8■□□□□ 0.44
TUBA4A-203ENST00000398989 GRAPQ13588 217 aa17.8■□□□□ 0.44
TUBA4A-203ENST00000398989 GRAPLQ8TC17 118 aaPredicted RBP17.8■□□□□ 0.44
TUBA4A-203ENST00000398989 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
TUBA4A-203ENST00000398989 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
TUBA4A-203ENST00000398989 F6X3S4 739 aa17.79■□□□□ 0.44
TUBA4A-203ENST00000398989 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms