RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZSWIM6Q9HCJ5 1215 aa23.37■■□□□ 1.33
COL13A1-205ENST00000398978 N4BP2Q86UW6 1770 aaPredicted RBP23.37■■□□□ 1.33
COL13A1-205ENST00000398978 EPHA10Q5JZY3 1008 aa23.37■■□□□ 1.33
COL13A1-205ENST00000398978 RIC3Q7Z5B4 369 aa23.37■■□□□ 1.33
COL13A1-205ENST00000398978 EVI5LQ96CN4 794 aa23.37■■□□□ 1.33
COL13A1-205ENST00000398978 USP42Q9H9J4 1324 aaKnown RBP23.36■■□□□ 1.33
COL13A1-205ENST00000398978 MTX1Q13505 466 aa23.36■■□□□ 1.33
COL13A1-205ENST00000398978 CAMK4Q16566 473 aa23.36■■□□□ 1.33
COL13A1-205ENST00000398978 VPS53Q5VIR6 699 aa23.36■■□□□ 1.33
COL13A1-205ENST00000398978 CDC37L1Q7L3B6 337 aa23.36■■□□□ 1.33
COL13A1-205ENST00000398978 ZNF589Q86UQ0 364 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-205ENST00000398978 TMEM87AQ8NBN3 555 aa23.36■■□□□ 1.33
COL13A1-205ENST00000398978 ZKSCAN1P17029 563 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-205ENST00000398978 EPB41L2O43491 1005 aaKnown RBP23.35■■□□□ 1.33
COL13A1-205ENST00000398978 IGKV5-2P06315 115 aa23.35■■□□□ 1.33
COL13A1-205ENST00000398978 TSC1Q92574 1164 aa23.35■■□□□ 1.33
COL13A1-205ENST00000398978 LARP1BQ659C4 914 aaKnown RBP23.35■■□□□ 1.33
COL13A1-205ENST00000398978 SLC27A2O14975 620 aa23.34■■□□□ 1.33
COL13A1-205ENST00000398978 AP5Z1O43299 807 aa23.34■■□□□ 1.33
COL13A1-205ENST00000398978 ALDH1L1O75891 902 aa23.34■■□□□ 1.33
COL13A1-205ENST00000398978 KCNH5Q8NCM2 988 aa23.34■■□□□ 1.33
COL13A1-205ENST00000398978 NFAT5O94916 1531 aa23.34■■□□□ 1.33
COL13A1-205ENST00000398978 TFIP11Q9UBB9 837 aaKnown RBP23.34■■□□□ 1.33
COL13A1-205ENST00000398978 KDM3BQ7LBC6 1761 aa23.33■■□□□ 1.33
COL13A1-205ENST00000398978 ARHGEF25Q86VW2 580 aa23.33■■□□□ 1.33
COL13A1-205ENST00000398978 SPC24Q8NBT2 197 aa23.33■■□□□ 1.33
COL13A1-205ENST00000398978 LINS1Q8NG48 757 aa23.33■■□□□ 1.32
COL13A1-205ENST00000398978 MYD88Q99836 296 aa23.33■■□□□ 1.32
COL13A1-205ENST00000398978 KIAA2012Q0VF49 1180 aa23.32■■□□□ 1.32
COL13A1-205ENST00000398978 PDIA6Q15084 440 aa23.32■■□□□ 1.32
COL13A1-205ENST00000398978 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-205ENST00000398978 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
COL13A1-205ENST00000398978 ERC1Q8IUD2 1116 aa23.32■■□□□ 1.32
COL13A1-205ENST00000398978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.31■■□□□ 1.32
COL13A1-205ENST00000398978 FAM177BA6PVY3 158 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 CCDC129Q6ZRS4 1044 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 TTC6Q86TZ1 520 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 XAGE3Q8WTP9 111 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 PPFIA3O75145 1194 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 MAP4K1Q92918 833 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 FOSBP53539 338 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 COPS6Q7L5N1 327 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 ATP6V1DQ9Y5K8 247 aa23.31■■□□□ 1.32
COL13A1-205ENST00000398978 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
COL13A1-205ENST00000398978 LIG1P18858 919 aa23.3■■□□□ 1.32
COL13A1-205ENST00000398978 SLFNL1Q499Z3 407 aa23.3■■□□□ 1.32
COL13A1-205ENST00000398978 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
COL13A1-205ENST00000398978 LRRC2Q9BYS8 371 aa23.3■■□□□ 1.32
COL13A1-205ENST00000398978 CKAP2LQ8IYA6 745 aa23.29■■□□□ 1.32
COL13A1-205ENST00000398978 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
COL13A1-205ENST00000398978 ATP5J2-PTCD1G3V325 749 aa23.29■■□□□ 1.32
COL13A1-205ENST00000398978 PTCD1O75127 700 aaKnown RBP23.29■■□□□ 1.32
COL13A1-205ENST00000398978 MCM5P33992 734 aa23.29■■□□□ 1.32
COL13A1-205ENST00000398978 DDX21Q9NR30 783 aaKnown RBP eCLIP23.29■■□□□ 1.32
COL13A1-205ENST00000398978 GLIPR1L2Q4G1C9 344 aa23.29■■□□□ 1.32
COL13A1-205ENST00000398978 BLOC1S2Q6QNY1 142 aa23.29■■□□□ 1.32
COL13A1-205ENST00000398978 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
COL13A1-205ENST00000398978 CSPP1Q1MSJ5 1256 aa23.28■■□□□ 1.32
COL13A1-205ENST00000398978 LARP1Q6PKG0 1096 aaKnown RBP23.28■■□□□ 1.32
COL13A1-205ENST00000398978 ANKLE2Q86XL3 938 aa23.28■■□□□ 1.32
COL13A1-205ENST00000398978 DDX11Q96FC9 970 aa23.28■■□□□ 1.32
COL13A1-205ENST00000398978 ZSCAN31Q96LW9 406 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-205ENST00000398978 DNAJC2Q99543 621 aaKnown RBP23.28■■□□□ 1.32
COL13A1-205ENST00000398978 SH2B1Q9NRF2 756 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-205ENST00000398978 NLRP2Q9NX02 1062 aa23.28■■□□□ 1.32
COL13A1-205ENST00000398978 FAM184AQ8NB25 1140 aa23.28■■□□□ 1.32
COL13A1-205ENST00000398978 KDM4AO75164 1064 aa23.27■■□□□ 1.32
COL13A1-205ENST00000398978 DDX58O95786 925 aaKnown RBP23.27■■□□□ 1.32
COL13A1-205ENST00000398978 FUCA2Q9BTY2 467 aa23.27■■□□□ 1.32
COL13A1-205ENST00000398978 JAK2O60674 1132 aa23.27■■□□□ 1.32
COL13A1-205ENST00000398978 TM6SF1Q9BZW5 370 aa23.27■■□□□ 1.32
COL13A1-205ENST00000398978 USP16Q9Y5T5 823 aa23.27■■□□□ 1.31
COL13A1-205ENST00000398978 NEURL1BA8MQ27 555 aa23.26■■□□□ 1.31
COL13A1-205ENST00000398978 TOB2Q14106 344 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-205ENST00000398978 ZNF790Q6PG37 636 aa23.26■■□□□ 1.31
COL13A1-205ENST00000398978 PDCL3Q9H2J4 239 aa23.26■■□□□ 1.31
COL13A1-205ENST00000398978 CHMP4AQ9BY43 222 aa23.26■■□□□ 1.31
COL13A1-205ENST00000398978 UVSSAQ2YD98 709 aa23.25■■□□□ 1.31
COL13A1-205ENST00000398978 KCNB2Q92953 911 aa23.25■■□□□ 1.31
COL13A1-205ENST00000398978 TFCP2Q12800 502 aa23.25■■□□□ 1.31
COL13A1-205ENST00000398978 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
COL13A1-205ENST00000398978 NOLC1Q14978 699 aaKnown RBP eCLIP23.24■■□□□ 1.31
COL13A1-205ENST00000398978 SASS6Q6UVJ0 657 aa23.24■■□□□ 1.31
COL13A1-205ENST00000398978 UBE3BQ7Z3V4 1068 aa23.24■■□□□ 1.31
COL13A1-205ENST00000398978 GCKRQ14397 625 aa23.24■■□□□ 1.31
COL13A1-205ENST00000398978 DBNLQ9UJU6 430 aaKnown RBP23.24■■□□□ 1.31
COL13A1-205ENST00000398978 CRYBG1Q9Y4K1 1723 aa23.24■■□□□ 1.31
COL13A1-205ENST00000398978 CEBPZQ03701 1054 aaKnown RBP23.24■■□□□ 1.31
COL13A1-205ENST00000398978 NEXNQ0ZGT2 675 aa23.24■■□□□ 1.31
COL13A1-205ENST00000398978 COL15A1P39059 1388 aa23.23■■□□□ 1.31
COL13A1-205ENST00000398978 RPS6KB1P23443 525 aa23.23■■□□□ 1.31
COL13A1-205ENST00000398978 HEG1Q9ULI3 1381 aa23.23■■□□□ 1.31
COL13A1-205ENST00000398978 LETM1O95202 739 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-205ENST00000398978 KRT85P78386 507 aa23.23■■□□□ 1.31
COL13A1-205ENST00000398978 DDX46Q7L014 1031 aaKnown RBP23.23■■□□□ 1.31
COL13A1-205ENST00000398978 LUZP1Q86V48 1076 aa23.23■■□□□ 1.31
COL13A1-205ENST00000398978 NPHP4O75161 1426 aaPredicted RBP23.22■■□□□ 1.31
COL13A1-205ENST00000398978 PSMA5P28066 241 aa23.22■■□□□ 1.31
COL13A1-205ENST00000398978 CABLES1Q8TDN4 633 aa23.22■■□□□ 1.31
COL13A1-205ENST00000398978 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms