RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 MX1P20591 662 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 TDRD12Q587J7 1177 aaKnown RBP10.78□□□□□ -0.68
ATL3-201ENST00000398868 ANKRD1Q15327 319 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 KAT14Q9H8E8 782 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 ACEP12821 1306 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 PRC1O43663 620 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 CDKL5O76039 1030 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 TSPY3P0CV98 308 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 TSPY8P0CW00 308 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 MAP3K11Q16584 847 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.68
ATL3-201ENST00000398868 ZKSCAN3Q9BRR0 538 aa10.77□□□□□ -0.68
ATL3-201ENST00000398868 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.68
ATL3-201ENST00000398868 TOM1O60784 492 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 DDB1Q16531 1140 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 TMCO4Q5TGY1 634 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 IQCEQ6IPM2 695 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 SSFA2P28290 1259 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 PA2G4Q9UQ80 394 aaKnown RBP10.77□□□□□ -0.69
ATL3-201ENST00000398868 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 GPIHBP1Q8IV16 184 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 TAF4BQ92750 862 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 C8orf76Q96K31 380 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
ATL3-201ENST00000398868 CYP7A1P22680 504 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 CTNNA2P26232 953 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
ATL3-201ENST00000398868 PPARDQ03181 441 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 RAB3GAP1Q15042 981 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 CATIPQ7Z7H3 387 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 NECAB1Q8N987 351 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 PARP3Q9Y6F1 533 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
ATL3-201ENST00000398868 CCDC194A0A1B0GVG4 234 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 KIF1BPQ96EK5 621 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 LMTK3Q96Q04 1460 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 TMEM110-MUSTN1A8MSY1 372 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 GNPATO15228 680 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 HARSP12081 509 aaKnown RBP10.76□□□□□ -0.69
ATL3-201ENST00000398868 MICALL1Q8N3F8 863 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 ZCRB1Q8TBF4 217 aaKnown RBP10.76□□□□□ -0.69
ATL3-201ENST00000398868 AFMP43652 599 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 CCDC91Q7Z6B0 441 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 DACH1Q9UI36 760 aa10.76□□□□□ -0.69
ATL3-201ENST00000398868 WASLO00401 505 aaPredicted RBP10.75□□□□□ -0.69
ATL3-201ENST00000398868 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 SMARCC1Q92922 1105 aaPredicted RBP10.75□□□□□ -0.69
ATL3-201ENST00000398868 DESP17661 470 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 ARID5AQ03989 594 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 KIF5CO60282 957 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 ADCY5O95622 1261 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 HLTFQ14527 1009 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATL3-201ENST00000398868 ZNF287Q9HBT7 754 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 GSTTP1A0A1W2PQM5 241 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 POLD1P28340 1107 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 MRPS9P82933 396 aaKnown RBP10.75□□□□□ -0.69
ATL3-201ENST00000398868 CEP57Q86XR8 500 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 C10orf67Q8IYJ2 551 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 XAGE3Q8WTP9 111 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 MCM2P49736 904 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 MAEAQ7L5Y9 396 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 MAATS1Q7Z4T9 603 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 LUC7LQ9NQ29 371 aaKnown RBP10.75□□□□□ -0.69
ATL3-201ENST00000398868 TRIM21P19474 475 aaKnown RBP10.75□□□□□ -0.69
ATL3-201ENST00000398868 COPS6Q7L5N1 327 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 PPP1R42Q7Z4L9 355 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 SLC4A4Q9Y6R1 1079 aa10.75□□□□□ -0.69
ATL3-201ENST00000398868 EPRSP07814 1512 aaKnown RBP10.75□□□□□ -0.69
ATL3-201ENST00000398868 HLA-DOAP06340 250 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 SFPQP23246 707 aaKnown RBP eCLIP10.74□□□□□ -0.69
ATL3-201ENST00000398868 NUP88Q99567 741 aaPredicted RBP10.74□□□□□ -0.69
ATL3-201ENST00000398868 CCDC150Q8NCX0 1101 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 CDC5LQ99459 802 aaKnown RBP10.74□□□□□ -0.69
ATL3-201ENST00000398868 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 BRD4O60885 1362 aaPredicted RBP10.74□□□□□ -0.69
ATL3-201ENST00000398868 FCHSD2O94868 740 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 TCP10Q12799 353 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 SMC1AQ14683 1233 aaKnown RBP10.74□□□□□ -0.69
ATL3-201ENST00000398868 IFNL2Q8IZJ0 200 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 KRT24Q2M2I5 525 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 TMC6Q7Z403 805 aa10.74□□□□□ -0.69
ATL3-201ENST00000398868 MSH6P52701 1360 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 PAIP2Q9BPZ3 127 aaKnown RBP10.73□□□□□ -0.69
ATL3-201ENST00000398868 CCDC175P0C221 793 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 FAM160A1Q05DH4 1040 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 CEP135Q66GS9 1140 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 MFSD6Q6ZSS7 791 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 ANKRD30BQ9BXX2 1392 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 PPP1R12BO60237 982 aaPredicted RBP10.73□□□□□ -0.69
ATL3-201ENST00000398868 ERCC3P19447 782 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 NOP2P46087 812 aaKnown RBP10.73□□□□□ -0.69
ATL3-201ENST00000398868 FLIIQ13045 1269 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 MAP9Q49MG5 647 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms