RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
CDH23-204ENST00000398792 ARHGEF1Q92888 912 aaKnown RBP20.82■□□□□ 0.92
CDH23-204ENST00000398792 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
CDH23-204ENST00000398792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
CDH23-204ENST00000398792 ATP8B2P98198 1209 aa20.82■□□□□ 0.92
CDH23-204ENST00000398792 MTX1Q13505 466 aa20.82■□□□□ 0.92
CDH23-204ENST00000398792 ZNF827Q17R98 1081 aa20.82■□□□□ 0.92
CDH23-204ENST00000398792 TRAPPC3LQ5T215 181 aa20.82■□□□□ 0.92
CDH23-204ENST00000398792 CAMKK2Q96RR4 588 aa20.82■□□□□ 0.92
CDH23-204ENST00000398792 SRP68Q9UHB9 627 aaKnown RBP20.82■□□□□ 0.92
CDH23-204ENST00000398792 PNMA6EA0A0J9YXQ4 647 aa20.81■□□□□ 0.92
CDH23-204ENST00000398792 PCCAP05165 728 aaPredicted RBP20.81■□□□□ 0.92
CDH23-204ENST00000398792 EN1Q05925 392 aaPredicted RBP20.81■□□□□ 0.92
CDH23-204ENST00000398792 SF3B2Q13435 895 aaKnown RBP20.81■□□□□ 0.92
CDH23-204ENST00000398792 USPL1Q5W0Q7 1092 aa20.81■□□□□ 0.92
CDH23-204ENST00000398792 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
CDH23-204ENST00000398792 AKT1S1Q96B36 256 aa20.81■□□□□ 0.92
CDH23-204ENST00000398792 BICC1Q9H694 974 aaKnown RBP20.81■□□□□ 0.92
CDH23-204ENST00000398792 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
CDH23-204ENST00000398792 ZPR1O75312 459 aa20.8■□□□□ 0.92
CDH23-204ENST00000398792 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
CDH23-204ENST00000398792 RFC4P35249 363 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 BAG6P46379 1132 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 EZH2Q15910 746 aaKnown RBP20.79■□□□□ 0.92
CDH23-204ENST00000398792 PARP10Q53GL7 1025 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 PPP1R42Q7Z4L9 355 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 SSH3Q8TE77 659 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 GCC1Q96CN9 775 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 NIP7Q9Y221 180 aaKnown RBP eCLIP20.79■□□□□ 0.92
CDH23-204ENST00000398792 LAMB2P55268 1798 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 CDHR2Q9BYE9 1310 aa20.79■□□□□ 0.92
CDH23-204ENST00000398792 EPHA10Q5JZY3 1008 aa20.78■□□□□ 0.92
CDH23-204ENST00000398792 SRGAP3O43295 1099 aa20.78■□□□□ 0.92
CDH23-204ENST00000398792 POLA2Q14181 598 aa20.78■□□□□ 0.92
CDH23-204ENST00000398792 RABL6Q3YEC7 729 aaPredicted RBP20.78■□□□□ 0.92
CDH23-204ENST00000398792 RTL5Q5HYW3 569 aaPredicted RBP20.78■□□□□ 0.92
CDH23-204ENST00000398792 DCTPP1Q9H773 170 aa20.78■□□□□ 0.92
CDH23-204ENST00000398792 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
CDH23-204ENST00000398792 QSER1Q2KHR3 1735 aa20.76■□□□□ 0.91
CDH23-204ENST00000398792 SUSD4Q5VX71 490 aa20.76■□□□□ 0.91
CDH23-204ENST00000398792 TRMT112Q9UI30 125 aaKnown RBP20.76■□□□□ 0.91
CDH23-204ENST00000398792 TBC1D9BQ66K14 1250 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
CDH23-204ENST00000398792 NTSR2O95665 410 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 FOXO4P98177 505 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 DEFB132Q7Z7B7 95 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 UTP14AQ9BVJ6 771 aaKnown RBP20.75■□□□□ 0.91
CDH23-204ENST00000398792 PLA2G12BQ9BX93 195 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 PDZRN3Q9UPQ7 1066 aa20.75■□□□□ 0.91
CDH23-204ENST00000398792 MYH3P11055 1940 aa20.74■□□□□ 0.91
CDH23-204ENST00000398792 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
CDH23-204ENST00000398792 SKAP1Q86WV1 359 aa20.73■□□□□ 0.91
CDH23-204ENST00000398792 CCDC125Q86Z20 511 aa20.73■□□□□ 0.91
CDH23-204ENST00000398792 SYNE4Q8N205 404 aa20.73■□□□□ 0.91
CDH23-204ENST00000398792 ANO8Q9HCE9 1232 aaPredicted RBP20.73■□□□□ 0.91
CDH23-204ENST00000398792 GYS1P13807 737 aa20.72■□□□□ 0.91
CDH23-204ENST00000398792 NUCB1Q02818 461 aa20.72■□□□□ 0.91
CDH23-204ENST00000398792 BICDL1Q6ZP65 573 aa20.72■□□□□ 0.91
CDH23-204ENST00000398792 FAM177BA6PVY3 158 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
CDH23-204ENST00000398792 LMBR1LQ6UX01 489 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 FLAD1Q8NFF5 587 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 EXOC6BQ9Y2D4 811 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 PNPLA7Q6ZV29 1317 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 CARMIL3Q8ND23 1372 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 SETDB2Q96T68 719 aa20.71■□□□□ 0.91
CDH23-204ENST00000398792 COL23A1Q86Y22 540 aaPredicted RBP20.7■□□□□ 0.9
CDH23-204ENST00000398792 SLC15A2Q16348 729 aa20.69■□□□□ 0.9
CDH23-204ENST00000398792 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
CDH23-204ENST00000398792 CHD1LQ86WJ1 897 aa20.69■□□□□ 0.9
CDH23-204ENST00000398792 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
CDH23-204ENST00000398792 NOP58Q9Y2X3 529 aaKnown RBP20.69■□□□□ 0.9
CDH23-204ENST00000398792 PDE8AO60658 829 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 SURF6O75683 361 aaKnown RBP20.68■□□□□ 0.9
CDH23-204ENST00000398792 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
CDH23-204ENST00000398792 CTSWP56202 376 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 NFIXQ14938 502 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 NYXQ9GZU5 481 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 CASZ1Q86V15 1759 aa20.68■□□□□ 0.9
CDH23-204ENST00000398792 CSF1RP07333 972 aa20.67■□□□□ 0.9
CDH23-204ENST00000398792 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
CDH23-204ENST00000398792 PA2G4Q9UQ80 394 aaKnown RBP20.67■□□□□ 0.9
CDH23-204ENST00000398792 ABCC12Q96J65 1359 aa20.67■□□□□ 0.9
CDH23-204ENST00000398792 NBPF5PQ86XG9 351 aaPredicted RBP20.67■□□□□ 0.9
CDH23-204ENST00000398792 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
CDH23-204ENST00000398792 LRP5O75197 1615 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 APBB1O00213 710 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 RAB11FIP3O75154 756 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 HCLS1P14317 486 aaPredicted RBP20.66■□□□□ 0.9
CDH23-204ENST00000398792 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
CDH23-204ENST00000398792 FAM161AQ3B820 660 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 HSP90AB4PQ58FF6 505 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 COPRSQ9NQ92 184 aa20.66■□□□□ 0.9
CDH23-204ENST00000398792 PDE4AP27815 886 aa20.65■□□□□ 0.9
CDH23-204ENST00000398792 RGS3P49796 1198 aa20.65■□□□□ 0.9
CDH23-204ENST00000398792 PTPN12Q05209 780 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms