RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 FLT4P35916 1363 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 TTC41PQ6P2S7 1318 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 CEP170BQ9Y4F5 1589 aaPredicted RBP9.8□□□□□ -0.84
TCF4-203ENST00000398339 SMTNL1A8MU46 457 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 GLRX3O76003 335 aaKnown RBP9.8□□□□□ -0.84
TCF4-203ENST00000398339 CAMK4Q16566 473 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 CBX8Q9HC52 389 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 CCDC171Q6TFL3 1326 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 GNAT3A8MTJ3 354 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 ZBTB22O15209 634 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 LARP1BQ659C4 914 aaKnown RBP9.79□□□□□ -0.84
TCF4-203ENST00000398339 NECAB1Q8N987 351 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 PHAXQ9H814 394 aaKnown RBP9.79□□□□□ -0.84
TCF4-203ENST00000398339 OGFRQ9NZT2 677 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 TTC21AQ8NDW8 1320 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 ZNF75DP51815 510 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 LRMPQ12912 555 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 ANO6Q4KMQ2 910 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 HSP90AB4PQ58FF6 505 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.79□□□□□ -0.84
TCF4-203ENST00000398339 PLA2G4DQ86XP0 818 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 BABAM1Q9NWV8 329 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
TCF4-203ENST00000398339 NECTIN1Q15223 517 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 ZSCAN25Q6NSZ9 544 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 CDC37L1Q7L3B6 337 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 DRC7Q8IY82 874 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 CKAP2LQ8IYA6 745 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 C16orf45Q96MC5 204 aaPredicted RBP9.78□□□□□ -0.84
TCF4-203ENST00000398339 TNMDQ9H2S6 317 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 NRBP1Q9UHY1 535 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 NBPF7P0C2Y1 421 aaPredicted RBP9.78□□□□□ -0.84
TCF4-203ENST00000398339 TNNT1P13805 278 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 TAF7Q15545 349 aaPredicted RBP9.78□□□□□ -0.84
TCF4-203ENST00000398339 RBM43Q6ZSC3 357 aaKnown RBP9.78□□□□□ -0.84
TCF4-203ENST00000398339 FERMT3Q86UX7 667 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 IL17REQ8NFR9 667 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 TDRD7Q8NHU6 1098 aaKnown RBP9.78□□□□□ -0.84
TCF4-203ENST00000398339 DDX19AQ9NUU7 478 aaKnown RBP9.78□□□□□ -0.84
TCF4-203ENST00000398339 DACT1Q9NYF0 836 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 CTNNA3Q9UI47 895 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 FMN2Q9NZ56 1722 aa9.78□□□□□ -0.84
TCF4-203ENST00000398339 NUTM2FA1L443 756 aa9.77□□□□□ -0.84
TCF4-203ENST00000398339 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.84
TCF4-203ENST00000398339 PDCP20941 246 aa9.77□□□□□ -0.84
TCF4-203ENST00000398339 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.84
TCF4-203ENST00000398339 DDX54Q8TDD1 881 aaKnown RBP9.77□□□□□ -0.84
TCF4-203ENST00000398339 TRIM5Q9C035 493 aa9.77□□□□□ -0.84
TCF4-203ENST00000398339 CLSTN2Q9H4D0 955 aa9.77□□□□□ -0.84
TCF4-203ENST00000398339 PAXBP1Q9Y5B6 917 aa9.77□□□□□ -0.84
TCF4-203ENST00000398339 CACNA1FO60840 1977 aa9.77□□□□□ -0.85
TCF4-203ENST00000398339 AMPHP49418 695 aa9.77□□□□□ -0.85
TCF4-203ENST00000398339 CREB3L3Q68CJ9 461 aa9.77□□□□□ -0.85
TCF4-203ENST00000398339 SCAND2PQ9GZW5 306 aaPredicted RBP9.77□□□□□ -0.85
TCF4-203ENST00000398339 AGLP35573 1532 aa9.77□□□□□ -0.85
TCF4-203ENST00000398339 ADGRL3Q9HAR2 1447 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 ADRA2BP18089 450 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 OS9Q13438 667 aaPredicted RBP9.76□□□□□ -0.85
TCF4-203ENST00000398339 BEND3Q5T5X7 828 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 CARD10Q9BWT7 1032 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 ECHDC1Q9NTX5 307 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
TCF4-203ENST00000398339 RBM8AQ9Y5S9 174 aaKnown RBP9.76□□□□□ -0.85
TCF4-203ENST00000398339 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 GOLGA6L4A6NEF3 574 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 CLASRPQ8N2M8 674 aaKnown RBP9.76□□□□□ -0.85
TCF4-203ENST00000398339 CCDC112Q8NEF3 446 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
TCF4-203ENST00000398339 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
TCF4-203ENST00000398339 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
TCF4-203ENST00000398339 PSMA5P28066 241 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 CDC25BP30305 580 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 HDGFP51858 240 aaKnown RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 CACTINQ8WUQ7 758 aaKnown RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 EVI5LQ96CN4 794 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 PSMD1Q99460 953 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 DDX41Q9UJV9 622 aaKnown RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 SLC27A2O14975 620 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 GABPB1Q06547 395 aaPredicted RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 FAM69CQ0P6D2 419 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 NAA30Q147X3 362 aaPredicted RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 TPD52L1Q16890 204 aaPredicted RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 MAP4K1Q92918 833 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
TCF4-203ENST00000398339 CLIP2Q9UDT6 1046 aa9.75□□□□□ -0.85
TCF4-203ENST00000398339 CHD2O14647 1828 aaKnown RBP9.74□□□□□ -0.85
TCF4-203ENST00000398339 KCNJ4P48050 445 aa9.74□□□□□ -0.85
TCF4-203ENST00000398339 ZNF165P49910 485 aa9.74□□□□□ -0.85
TCF4-203ENST00000398339 MTX1Q13505 466 aa9.74□□□□□ -0.85
TCF4-203ENST00000398339 ANKRD1Q15327 319 aa9.74□□□□□ -0.85
TCF4-203ENST00000398339 CCDC144BQ3MJ40 725 aa9.74□□□□□ -0.85
TCF4-203ENST00000398339 LARP1Q6PKG0 1096 aaKnown RBP9.74□□□□□ -0.85
TCF4-203ENST00000398339 CCDC144CPQ8IYA2 1237 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms