RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 SPATA24Q86W54 205 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 FAM200AQ8TCP9 573 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 SREK1Q8WXA9 508 aaKnown RBP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 C8orf76Q96K31 380 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 TRIM6Q9C030 488 aaPredicted RBP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 GOLIM4O00461 696 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 HLTFQ14527 1009 aaKnown RBP eCLIP12.94□□□□□ -0.34
RGPD2-201ENST00000398146 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
RGPD2-201ENST00000398146 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 MSH6P52701 1360 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
RGPD2-201ENST00000398146 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
RGPD2-201ENST00000398146 FAM13AO94988 1023 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 KIF4AO95239 1232 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 AMPD3Q01432 767 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 TAF7Q15545 349 aaPredicted RBP12.93□□□□□ -0.34
RGPD2-201ENST00000398146 NFE2L2Q16236 605 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 TICAM2Q86XR7 235 aa12.93□□□□□ -0.34
RGPD2-201ENST00000398146 KRT13P13646 458 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
RGPD2-201ENST00000398146 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
RGPD2-201ENST00000398146 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 GIMAP7Q8NHV1 300 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
RGPD2-201ENST00000398146 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CFAP58Q5T655 872 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 ISM2Q6H9L7 571 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CWC25Q9NXE8 425 aaPredicted RBP12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CRCPO75575 148 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 ABL1P00519 1130 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CYP7A1P22680 504 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 MXRA7P84157 204 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CCDC50Q8IVM0 306 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
RGPD2-201ENST00000398146 WDR33Q9C0J8 1336 aaKnown RBP12.92□□□□□ -0.34
RGPD2-201ENST00000398146 CUL4BQ13620 913 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 A0A1W2PRG0 241 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 MICU3Q86XE3 530 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
RGPD2-201ENST00000398146 M0QZ92 97 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 MBD3O95983 291 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 SMCR8Q8TEV9 937 aaPredicted RBP12.91□□□□□ -0.34
RGPD2-201ENST00000398146 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
RGPD2-201ENST00000398146 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
RGPD2-201ENST00000398146 CNNM3Q8NE01 707 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 CRACR2AQ9BSW2 395 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 TPD52P55327 224 aaPredicted RBP12.9□□□□□ -0.34
RGPD2-201ENST00000398146 SKIV2LQ15477 1246 aaKnown RBP12.9□□□□□ -0.34
RGPD2-201ENST00000398146 CHST3Q7LGC8 479 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 IQCGQ9H095 443 aaKnown RBP12.9□□□□□ -0.34
RGPD2-201ENST00000398146 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
RGPD2-201ENST00000398146 CASQ1P31415 396 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 TTF1Q15361 905 aaPredicted RBP12.9□□□□□ -0.34
RGPD2-201ENST00000398146 ZBTB33Q86T24 672 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 IRAK4Q9NWZ3 460 aa12.9□□□□□ -0.34
RGPD2-201ENST00000398146 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.35
RGPD2-201ENST00000398146 HSPA2P54652 639 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 EXOC1Q9NV70 894 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 GNPATO15228 680 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 C6orf50Q9HD87 102 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 UBA7P41226 1012 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
RGPD2-201ENST00000398146 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
RGPD2-201ENST00000398146 USP37Q86T82 979 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 CCDC89Q8N998 374 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 CCT6BQ92526 530 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 SLC4A4Q9Y6R1 1079 aa12.89□□□□□ -0.35
RGPD2-201ENST00000398146 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 CCDC65Q8IXS2 484 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms