RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
SH3KBP1-205ENST00000397821 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
SH3KBP1-205ENST00000397821 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
SH3KBP1-205ENST00000397821 IVLP07476 585 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.253e-6■■■■□ 22.9
SH3KBP1-205ENST00000397821 FAM69CQ0P6D2 419 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 NSD2O96028 1365 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 HAND2P61296 217 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 IFFO1Q0D2I5 559 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 TSC1Q92574 1164 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 SRRTQ9BXP5 876 aaKnown RBP16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 NAPBQ9H115 298 aa16.64■□□□□ 0.25
SH3KBP1-205ENST00000397821 ZRSR2Q15696 482 aaKnown RBP16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 TDRD12Q587J7 1177 aaKnown RBP16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 GOLIM4O00461 696 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 C10orf67Q8IYJ2 551 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 USHBP1Q8N6Y0 703 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 METTL24Q5JXM2 366 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 SLC12A7Q9Y666 1083 aa16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
SH3KBP1-205ENST00000397821 CTAGE15A4D2H0 777 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 N4BP3O15049 544 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 CTAGE8P0CG41 777 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 CTAGE6Q86UF2 777 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 CTAGE4Q8IX94 777 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 PHACTR2O75167 634 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 VAMP4O75379 141 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 ANXA1P04083 346 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 ATF3P18847 181 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
SH3KBP1-205ENST00000397821 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
SH3KBP1-205ENST00000397821 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
SH3KBP1-205ENST00000397821 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
SH3KBP1-205ENST00000397821 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
SH3KBP1-205ENST00000397821 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
SH3KBP1-205ENST00000397821 TUBB4AP04350 444 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 SNRKQ9NRH2 765 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 IFNKQ9P0W0 207 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.25
SH3KBP1-205ENST00000397821 CCDC175P0C221 793 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 MAATS1Q7Z4T9 603 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 A0A087WZG4 1122 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 GOLGA6L10A0A0M3HER8 536 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 CHMLP26374 656 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 GAS2L3Q86XJ1 694 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 GOLGA1Q92805 767 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 TMEM63CQ9P1W3 806 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 VPS18Q9P253 973 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
SH3KBP1-205ENST00000397821 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.25
SH3KBP1-205ENST00000397821 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.25
SH3KBP1-205ENST00000397821 NAA15Q9BXJ9 866 aaKnown RBP16.58■□□□□ 0.25
SH3KBP1-205ENST00000397821 KIF14Q15058 1648 aa16.58■□□□□ 0.25
SH3KBP1-205ENST00000397821 CPA1P15085 419 aa16.58■□□□□ 0.25
SH3KBP1-205ENST00000397821 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
SH3KBP1-205ENST00000397821 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
SH3KBP1-205ENST00000397821 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
SH3KBP1-205ENST00000397821 ALS2CR12Q96Q35 445 aa16.58■□□□□ 0.24
SH3KBP1-205ENST00000397821 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
SH3KBP1-205ENST00000397821 ATP2C2O75185 946 aa16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 ANKRD36BQ8N2N9 1353 aa16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 KARSQ15046 597 aaKnown RBP16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 Q6ZUG5 572 aa16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 METAP2P50579 478 aaKnown RBP eCLIP16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 CTCFLQ8NI51 663 aaPredicted RBP16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 RASSF4Q9H2L5 321 aa16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
SH3KBP1-205ENST00000397821 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
SH3KBP1-205ENST00000397821 KANK3Q6NY19 840 aa16.56■□□□□ 0.24
SH3KBP1-205ENST00000397821 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
SH3KBP1-205ENST00000397821 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
SH3KBP1-205ENST00000397821 PUF60Q9UHX1 559 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms