RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 POLRMTO00411 1230 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-205ENST00000397406 DPEP1P16444 411 aa21.38■■□□□ 1.01
TSPAN4-205ENST00000397406 ZBTB40Q9NUA8 1239 aa21.38■■□□□ 1.01
TSPAN4-205ENST00000397406 ZNF330Q9Y3S2 320 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-205ENST00000397406 PARP3Q9Y6F1 533 aa21.38■■□□□ 1.01
TSPAN4-205ENST00000397406 TGFB2P61812 414 aa21.37■■□□□ 1.01
TSPAN4-205ENST00000397406 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-205ENST00000397406 SRCIN1Q9C0H9 1055 aa21.37■■□□□ 1.01
TSPAN4-205ENST00000397406 NARFQ9UHQ1 456 aa21.37■■□□□ 1.01
TSPAN4-205ENST00000397406 IBTKQ9P2D0 1353 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-205ENST00000397406 MAP3K15Q6ZN16 1313 aa21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 SCN7AQ01118 1682 aa21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 NFIXQ14938 502 aa21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 KIF6Q6ZMV9 814 aa21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 LINS1Q8NG48 757 aa21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 ZBTB3Q9H5J0 574 aa21.35■■□□□ 1.01
TSPAN4-205ENST00000397406 ALDH1L1O75891 902 aa21.34■■□□□ 1.01
TSPAN4-205ENST00000397406 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
TSPAN4-205ENST00000397406 MEIS3Q99687 375 aa21.34■■□□□ 1.01
TSPAN4-205ENST00000397406 MYD88Q99836 296 aa21.34■■□□□ 1.01
TSPAN4-205ENST00000397406 ZPR1O75312 459 aa21.33■■□□□ 1.01
TSPAN4-205ENST00000397406 DZIP3Q86Y13 1208 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-205ENST00000397406 NEXNQ0ZGT2 675 aa21.32■■□□□ 1
TSPAN4-205ENST00000397406 CWF19L2Q2TBE0 894 aaKnown RBP21.32■■□□□ 1
TSPAN4-205ENST00000397406 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
TSPAN4-205ENST00000397406 ERVV-1B6SEH8 477 aa21.31■■□□□ 1
TSPAN4-205ENST00000397406 USP44Q9H0E7 712 aa21.31■■□□□ 1
TSPAN4-205ENST00000397406 TBC1D2BQ9UPU7 963 aa21.31■■□□□ 1
TSPAN4-205ENST00000397406 NEURL1BA8MQ27 555 aa21.3■■□□□ 1
TSPAN4-205ENST00000397406 B4GALNT3Q6L9W6 998 aa21.3■■□□□ 1
TSPAN4-205ENST00000397406 GIGYF2Q6Y7W6 1299 aaKnown RBP21.3■■□□□ 1
TSPAN4-205ENST00000397406 PCDHB15Q9Y5E8 787 aa21.3■■□□□ 1
TSPAN4-205ENST00000397406 A0A087WZG4 1122 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 CHRNA5P30532 468 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 HLFQ16534 295 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 CAMTA2O94983 1202 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 GNAI3P08754 354 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 TCIRG1Q13488 830 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 BCS1LQ9Y276 419 aa21.29■■□□□ 1
TSPAN4-205ENST00000397406 CARMIL3Q8ND23 1372 aa21.28■■□□□ 1
TSPAN4-205ENST00000397406 ATP5J2-PTCD1G3V325 749 aa21.28■■□□□ 1
TSPAN4-205ENST00000397406 GCKRQ14397 625 aa21.28■■□□□ 1
TSPAN4-205ENST00000397406 TBC1D9BQ66K14 1250 aa21.28■■□□□ 1
TSPAN4-205ENST00000397406 C1orf115Q9H7X2 142 aa21.28■■□□□ 1
TSPAN4-205ENST00000397406 NRXN2Q9P2S2 1712 aa21.27■■□□□ 1
TSPAN4-205ENST00000397406 UTYO14607 1347 aa21.27■■□□□ 1
TSPAN4-205ENST00000397406 BRCA1P38398 1863 aaKnown RBP21.27■■□□□ 1
TSPAN4-205ENST00000397406 SERPINB2P05120 415 aa21.26■□□□□ 0.99
TSPAN4-205ENST00000397406 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-205ENST00000397406 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-205ENST00000397406 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
TSPAN4-205ENST00000397406 GRM8O00222 908 aa21.25■□□□□ 0.99
TSPAN4-205ENST00000397406 RGL2O15211 777 aa21.25■□□□□ 0.99
TSPAN4-205ENST00000397406 BICDL1Q6ZP65 573 aa21.25■□□□□ 0.99
TSPAN4-205ENST00000397406 CCDC191Q8NCU4 936 aa21.25■□□□□ 0.99
TSPAN4-205ENST00000397406 GNAI2P04899 355 aa21.24■□□□□ 0.99
TSPAN4-205ENST00000397406 UBTFL1P0CB47 393 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-205ENST00000397406 C9orf78Q9NZ63 289 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-205ENST00000397406 ZNF34Q8IZ26 560 aa21.23■□□□□ 0.99
TSPAN4-205ENST00000397406 CWC25Q9NXE8 425 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-205ENST00000397406 C1QTNF8P60827 252 aa21.22■□□□□ 0.99
TSPAN4-205ENST00000397406 CLEC4GQ6UXB4 293 aa21.22■□□□□ 0.99
TSPAN4-205ENST00000397406 PIM2Q9P1W9 311 aa21.22■□□□□ 0.99
TSPAN4-205ENST00000397406 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 IGHDP01880 384 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 CASP7P55210 303 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 CEP85Q6P2H3 762 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 SIRT2Q8IXJ6 389 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 CCDC24Q8N4L8 307 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 LRRFIP2Q9Y608 721 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 UBN2Q6ZU65 1347 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 H7C1W4 665 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 GPTP24298 496 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 ARHGAP27Q6ZUM4 889 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 NLRP10Q86W26 655 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 ANKRD44Q8N8A2 993 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 ZNF652Q9Y2D9 606 aa21.21■□□□□ 0.99
TSPAN4-205ENST00000397406 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-205ENST00000397406 DALRD3Q5D0E6 543 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-205ENST00000397406 ZNF526Q8TF50 670 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-205ENST00000397406 KAZALD1Q96I82 304 aa21.19■□□□□ 0.98
TSPAN4-205ENST00000397406 SUCLG2Q96I99 432 aa21.19■□□□□ 0.98
TSPAN4-205ENST00000397406 LAMB2P55268 1798 aa21.18■□□□□ 0.98
TSPAN4-205ENST00000397406 MYH3P11055 1940 aa21.18■□□□□ 0.98
TSPAN4-205ENST00000397406 PRR5LQ6MZQ0 368 aa21.18■□□□□ 0.98
TSPAN4-205ENST00000397406 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
TSPAN4-205ENST00000397406 RWDD1Q9H446 243 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-205ENST00000397406 HDAC5Q9UQL6 1122 aa21.18■□□□□ 0.98
TSPAN4-205ENST00000397406 PRELPP51888 382 aa21.17■□□□□ 0.98
TSPAN4-205ENST00000397406 CENPQQ7L2Z9 268 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-205ENST00000397406 JARID2Q92833 1246 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-205ENST00000397406 DDX60Q8IY21 1712 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-205ENST00000397406 PCCAP05165 728 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-205ENST00000397406 ZBTB38Q8NAP3 1195 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-205ENST00000397406 NIP7Q9Y221 180 aaKnown RBP eCLIP21.16■□□□□ 0.98
TSPAN4-205ENST00000397406 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms