RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ST3GAL1Q11201 340 aa10.86□□□□□ -0.67
CAPN3-206ENST00000397163 CDC37L1Q7L3B6 337 aa10.86□□□□□ -0.67
CAPN3-206ENST00000397163 FLT4P35916 1363 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TNNT1P13805 278 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 FEZ1Q99689 392 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
CAPN3-206ENST00000397163 NRBP1Q9UHY1 535 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TUBGCP6Q96RT7 1819 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 SETD1AO15047 1707 aaKnown RBP10.85□□□□□ -0.67
CAPN3-206ENST00000397163 PDCP20941 246 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 CHMP4CQ96CF2 233 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TIGD1Q96MW7 591 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TPCN1Q9ULQ1 816 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 USP31Q70CQ4 1352 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TMEM2Q9UHN6 1383 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 TTC41PQ6P2S7 1318 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 IGSF1Q8N6C5 1336 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 USP6P35125 1406 aa10.85□□□□□ -0.67
CAPN3-206ENST00000397163 GPATCH3Q96I76 525 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 IFIT2P09913 472 aaKnown RBP10.84□□□□□ -0.67
CAPN3-206ENST00000397163 TERF2Q15554 542 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 LTV1Q96GA3 475 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-206ENST00000397163 ECHDC1Q9NTX5 307 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 RBM8AQ9Y5S9 174 aaKnown RBP10.84□□□□□ -0.67
CAPN3-206ENST00000397163 SBNO1A3KN83 1393 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 KDRP35968 1356 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 ITSN1Q15811 1721 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 ZNF75DP51815 510 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 TPD52L1Q16890 204 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-206ENST00000397163 BICD2Q8TD16 824 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 TCEANC2Q96MN5 208 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 DDX19AQ9NUU7 478 aaKnown RBP10.84□□□□□ -0.67
CAPN3-206ENST00000397163 PEAK1Q9H792 1746 aa10.84□□□□□ -0.67
CAPN3-206ENST00000397163 CCDC171Q6TFL3 1326 aa10.83□□□□□ -0.67
CAPN3-206ENST00000397163 PI4KAP2A4QPH2 592 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 GABPB1Q06547 395 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-206ENST00000397163 CREB3L3Q68CJ9 461 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 ZSCAN25Q6NSZ9 544 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 PI4KAP1Q8N8J0 262 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 CCDC112Q8NEF3 446 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 SCAND2PQ9GZW5 306 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-206ENST00000397163 DDX41Q9UJV9 622 aaKnown RBP10.83□□□□□ -0.68
CAPN3-206ENST00000397163 ELP1O95163 1332 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 CCDC66A2RUB6 948 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 PSMA5P28066 241 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 ZNF165P49910 485 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 NECTIN1Q15223 517 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 NGDNQ8NEJ9 315 aaKnown RBP10.83□□□□□ -0.68
CAPN3-206ENST00000397163 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
CAPN3-206ENST00000397163 KIF18AQ8NI77 898 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 CLIP2Q9UDT6 1046 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 PXDNLA1KZ92 1463 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 HSPA2P54652 639 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 BLOC1S2Q6QNY1 142 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 EVI5LQ96CN4 794 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 NPHP3Q7Z494 1330 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
CAPN3-206ENST00000397163 TECPR2O15040 1411 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 ANXA1P04083 346 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 STK3Q13188 491 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 LARP1Q6PKG0 1096 aaKnown RBP10.82□□□□□ -0.68
CAPN3-206ENST00000397163 LEO1Q8WVC0 666 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-206ENST00000397163 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 TMX1Q9H3N1 280 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 CLSTN2Q9H4D0 955 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 CHPF2Q9P2E5 772 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 PAXBP1Q9Y5B6 917 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 NRXN3Q9Y4C0 1643 aa10.82□□□□□ -0.68
CAPN3-206ENST00000397163 BEND3Q5T5X7 828 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-206ENST00000397163 AACSQ86V21 672 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 KCNB2Q92953 911 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 PA2G4Q9UQ80 394 aaKnown RBP10.81□□□□□ -0.68
CAPN3-206ENST00000397163 RGPD1P0DJD0 1748 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
CAPN3-206ENST00000397163 DIP2AQ14689 1571 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 SLC27A2O14975 620 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 TDRD7Q8NHU6 1098 aaKnown RBP10.81□□□□□ -0.68
CAPN3-206ENST00000397163 CACTINQ8WUQ7 758 aaKnown RBP10.81□□□□□ -0.68
CAPN3-206ENST00000397163 TTC21AQ8NDW8 1320 aa10.81□□□□□ -0.68
CAPN3-206ENST00000397163 GOLGA6L19H0YKK7 550 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 NR1I2O75469 434 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 NMIQ13287 307 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-206ENST00000397163 ANKRD1Q15327 319 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 KMT5BQ4FZB7 885 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 DNAJC2Q99543 621 aaKnown RBP10.8□□□□□ -0.68
CAPN3-206ENST00000397163 BABAM1Q9NWV8 329 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 C9orf78Q9NZ63 289 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms