RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TBCAO75347 108 aaKnown RBP14.1□□□□□ -0.15
SMU1-201ENST00000397149 EP400NLQ6ZTU2 488 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
SMU1-201ENST00000397149 HSPA1LP34931 641 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 A0A087WZG4 1122 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 FSIP1Q8NA03 581 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 TLDC2A0PJX2 215 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 KIF2AO00139 706 aaPredicted RBP14.1□□□□□ -0.15
SMU1-201ENST00000397149 GABPAQ06546 454 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
SMU1-201ENST00000397149 HGSO14964 777 aaPredicted RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 MCM6Q14566 821 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 TTF1Q15361 905 aaPredicted RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 ZNF622Q969S3 477 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■□□□□ 9.4
SMU1-201ENST00000397149 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 RRP9O43818 475 aaKnown RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 AKR1B10O60218 316 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 IFIT1P09914 478 aaKnown RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 SARNPP82979 210 aaKnown RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 TRIM7Q9C029 511 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 GNG11P61952 73 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 CATIPQ7Z7H3 387 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 TFIP11Q9UBB9 837 aaKnown RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 USP25Q9UHP3 1055 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
SMU1-201ENST00000397149 TRIM47Q96LD4 638 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 EXOC6BQ9Y2D4 811 aa14.09□□□□□ -0.15
SMU1-201ENST00000397149 AMPD3Q01432 767 aa14.08□□□□□ -0.15
SMU1-201ENST00000397149 ZBTB21Q9ULJ3 1066 aa14.08□□□□□ -0.15
SMU1-201ENST00000397149 ZNF213O14771 459 aa14.08□□□□□ -0.15
SMU1-201ENST00000397149 PPP4R4Q6NUP7 873 aa14.08□□□□□ -0.15
SMU1-201ENST00000397149 SNW1Q13573 536 aaKnown RBP14.08□□□□□ -0.16
SMU1-201ENST00000397149 ZEB2O60315 1214 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 NOP9Q86U38 636 aaKnown RBP14.08□□□□□ -0.16
SMU1-201ENST00000397149 MIA2Q96PC5 1412 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 CCDC196A0A1B0GTZ2 297 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 SEPT8Q92599 483 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 ZFYP08048 801 aaPredicted RBP14.08□□□□□ -0.16
SMU1-201ENST00000397149 ZC3H6P61129 1189 aaKnown RBP14.08□□□□□ -0.16
SMU1-201ENST00000397149 SP4Q02446 784 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 CCDC14Q49A88 953 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 CCDC114Q96M63 670 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 SPAG5Q96R06 1193 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 PHAXQ9H814 394 aaKnown RBP14.08□□□□□ -0.16
SMU1-201ENST00000397149 CABP5Q9NP86 173 aa14.08□□□□□ -0.16
SMU1-201ENST00000397149 VPS52Q8N1B4 723 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 ANKS4BQ8N8V4 417 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.07□□□□□ -0.16
SMU1-201ENST00000397149 UBA7P41226 1012 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 SETDB1Q15047 1291 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 EXOC1Q9NV70 894 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 MPHOSPH6Q99547 160 aaKnown RBP14.07□□□□□ -0.16
SMU1-201ENST00000397149 PLVAPQ9BX97 442 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 RASAL2Q9UJF2 1139 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 RIOK3O14730 519 aaKnown RBP14.07□□□□□ -0.16
SMU1-201ENST00000397149 AFMP43652 599 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 F8W031 263 aaPredicted RBP14.07□□□□□ -0.16
SMU1-201ENST00000397149 STARD3NLO95772 234 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 CHD1LQ86WJ1 897 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 CAPZA3Q96KX2 299 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 CCDC77Q9BR77 488 aa14.07□□□□□ -0.16
SMU1-201ENST00000397149 IFI16Q16666 785 aaKnown RBP14.06□□□□□ -0.16
SMU1-201ENST00000397149 STIM2Q9P246 746 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 ZNF652Q9Y2D9 606 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
SMU1-201ENST00000397149 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 FMNL3Q8IVF7 1028 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 MYD88Q99836 296 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 CCDC121Q6ZUS5 278 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
SMU1-201ENST00000397149 RNF34Q969K3 372 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 FRMD4BQ9Y2L6 1034 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 GNL1P36915 607 aaPredicted RBP14.06□□□□□ -0.16
SMU1-201ENST00000397149 SELENOOQ9BVL4 669 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 PPP1R12CQ9BZL4 782 aa14.06□□□□□ -0.16
SMU1-201ENST00000397149 CCDC8Q9H0W5 538 aaPredicted RBP14.06□□□□□ -0.16
SMU1-201ENST00000397149 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 PRR16Q569H4 304 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 DDX27Q96GQ7 796 aaKnown RBP14.05□□□□□ -0.16
SMU1-201ENST00000397149 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
SMU1-201ENST00000397149 ATP2A1O14983 1001 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 N4BP3O15049 544 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 WDR63Q8IWG1 891 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 DDX12PQ92771 950 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 MAK16Q9BXY0 300 aaKnown RBP14.05□□□□□ -0.16
SMU1-201ENST00000397149 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 CCDC183Q5T5S1 534 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 NACADO15069 1562 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.05□□□□□ -0.16
SMU1-201ENST00000397149 FAM13AO94988 1023 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 PPANQ9NQ55 473 aaKnown RBP14.05□□□□□ -0.16
SMU1-201ENST00000397149 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
SMU1-201ENST00000397149 FCHSD2O94868 740 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms