RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 LRRC59Q96AG4 307 aaKnown RBP17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 A0A0G2JS52 829 aa17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 NAA30Q147X3 362 aaPredicted RBP17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 SMC2O95347 1197 aa17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 CREB3L3Q68CJ9 461 aa17.4■□□□□ 0.38
RAPGEF4-201ENST00000397081 JAK2O60674 1132 aa17.39■□□□□ 0.37
RAPGEF4-201ENST00000397081 NEXNQ0ZGT2 675 aa17.39■□□□□ 0.37
RAPGEF4-201ENST00000397081 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
RAPGEF4-201ENST00000397081 BIN1O00499 593 aa17.39■□□□□ 0.37
RAPGEF4-201ENST00000397081 CHST3Q7LGC8 479 aa17.39■□□□□ 0.37
RAPGEF4-201ENST00000397081 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 SH2B1Q9NRF2 756 aaPredicted RBP17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 CD163L1Q9NR16 1453 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 RGS12O14924 1447 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 LSG1Q9H089 658 aaKnown RBP17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 CCAR2Q8N163 923 aaKnown RBP17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 CCDC129Q6ZRS4 1044 aa17.38■□□□□ 0.37
RAPGEF4-201ENST00000397081 REREQ9P2R6 1566 aa17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 KIF24Q5T7B8 1368 aa17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 TRERF1Q96PN7 1200 aa17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 BRF1Q92994 677 aa17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 CBX8Q9HC52 389 aa17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
RAPGEF4-201ENST00000397081 TPM3P06753 285 aa17.36■□□□□ 0.37
RAPGEF4-201ENST00000397081 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
RAPGEF4-201ENST00000397081 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
RAPGEF4-201ENST00000397081 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
RAPGEF4-201ENST00000397081 CCDC85AQ96PX6 553 aaPredicted RBP17.36■□□□□ 0.37
RAPGEF4-201ENST00000397081 SCAND2PQ9GZW5 306 aaPredicted RBP17.36■□□□□ 0.37
RAPGEF4-201ENST00000397081 NRDCO43847 1150 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 EVI5LQ96CN4 794 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 PHF8Q9UPP1 1060 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 NR1I2O75469 434 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 TMX1Q9H3N1 280 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
RAPGEF4-201ENST00000397081 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 SMAP1Q8IYB5 467 aaPredicted RBP17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 STAP2Q9UGK3 403 aa17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 PRAMEF22A3QJZ6 481 aa17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 VPS53Q5VIR6 699 aa17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 TLR7Q9NYK1 1049 aaKnown RBP17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 PODXL2Q9NZ53 605 aa17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 ATP5J2-PTCD1G3V325 749 aa17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 PTCD1O75127 700 aaKnown RBP17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 ATF3P18847 181 aa17.34■□□□□ 0.37
RAPGEF4-201ENST00000397081 AP5Z1O43299 807 aa17.33■□□□□ 0.37
RAPGEF4-201ENST00000397081 PTPN14Q15678 1187 aa17.33■□□□□ 0.37
RAPGEF4-201ENST00000397081 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.37
RAPGEF4-201ENST00000397081 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.37
RAPGEF4-201ENST00000397081 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 KIAA1524Q8TCG1 905 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 ARID5BQ14865 1188 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 MYD88Q99836 296 aa17.33■□□□□ 0.36
RAPGEF4-201ENST00000397081 FLT4P35916 1363 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 SLC27A2O14975 620 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 ANKRD1Q15327 319 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 HOXC9P31274 260 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 WASHC4Q2M389 1173 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 Q6ZUG5 572 aa17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 RPAP1Q9BWH6 1393 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF4-201ENST00000397081 SKILP12757 684 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 CEP135Q66GS9 1140 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 SEC62Q99442 399 aaKnown RBP17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 KCNF1Q9H3M0 494 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 CPLX1O14810 134 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 CHGBP05060 677 aa17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 NCOA5Q9HCD5 579 aaKnown RBP17.31■□□□□ 0.36
RAPGEF4-201ENST00000397081 MRVI1Q9Y6F6 885 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 HAND2P61296 217 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 DDX19AQ9NUU7 478 aaKnown RBP17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms