RNA–Protein interactions for RNA: ENST00000396761.6

ATG9A-202, Transcript of autophagy related 9A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG9A, Length 3,799 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-202ENST00000396761 HOXC9P31274 260 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
ATG9A-202ENST00000396761 IL25Q9H293 177 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 LARGE1O95461 756 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 TEFQ10587 303 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 ZRSR1Q15695 479 aaKnown RBP12.78□□□□□ -0.36
ATG9A-202ENST00000396761 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
ATG9A-202ENST00000396761 REREQ9P2R6 1566 aa12.77□□□□□ -0.36
ATG9A-202ENST00000396761 ANXA1P04083 346 aa12.77□□□□□ -0.36
ATG9A-202ENST00000396761 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.36
ATG9A-202ENST00000396761 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.36
ATG9A-202ENST00000396761 SPATA32Q96LK8 384 aa12.77□□□□□ -0.36
ATG9A-202ENST00000396761 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
ATG9A-202ENST00000396761 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
ATG9A-202ENST00000396761 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
ATG9A-202ENST00000396761 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
ATG9A-202ENST00000396761 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.37
ATG9A-202ENST00000396761 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.37
ATG9A-202ENST00000396761 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
ATG9A-202ENST00000396761 CTIFO43310 598 aaKnown RBP12.76□□□□□ -0.37
ATG9A-202ENST00000396761 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
ATG9A-202ENST00000396761 SETD1AO15047 1707 aaKnown RBP12.76□□□□□ -0.37
ATG9A-202ENST00000396761 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
ATG9A-202ENST00000396761 PNMA6EA0A0J9YXQ4 647 aa12.76□□□□□ -0.37
ATG9A-202ENST00000396761 DDX11Q96FC9 970 aa12.76□□□□□ -0.37
ATG9A-202ENST00000396761 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
ATG9A-202ENST00000396761 CCDC144BQ3MJ40 725 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 TTC6Q86TZ1 520 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 PHAXQ9H814 394 aaKnown RBP12.75□□□□□ -0.37
ATG9A-202ENST00000396761 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 ZNF75DP51815 510 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 RUFY3Q7L099 469 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 MRVI1Q9Y6F6 885 aa12.75□□□□□ -0.37
ATG9A-202ENST00000396761 IGSF1Q8N6C5 1336 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 SMC2O95347 1197 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
ATG9A-202ENST00000396761 MNS1Q8NEH6 495 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 CRB1P82279 1406 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
ATG9A-202ENST00000396761 H3BQV1 296 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 TEX35Q5T0J7 233 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
ATG9A-202ENST00000396761 MPRIPQ6WCQ1 1025 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
ATG9A-202ENST00000396761 LRRC59Q96AG4 307 aaKnown RBP12.74□□□□□ -0.37
ATG9A-202ENST00000396761 C3P01024 1663 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 SYT10Q6XYQ8 523 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 TOMM22Q9NS69 142 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
ATG9A-202ENST00000396761 USP31Q70CQ4 1352 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 MAP3K5Q99683 1374 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
ATG9A-202ENST00000396761 MTMR6Q9Y217 621 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
ATG9A-202ENST00000396761 ANAPC15P60006 121 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 ZCCHC17Q9NP64 241 aaKnown RBP12.72□□□□□ -0.37
ATG9A-202ENST00000396761 CYP46A1Q9Y6A2 500 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 RGS12O14924 1447 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
ATG9A-202ENST00000396761 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
ATG9A-202ENST00000396761 MORC2Q9Y6X9 1032 aaPredicted RBP12.72□□□□□ -0.37
ATG9A-202ENST00000396761 NR1I2O75469 434 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 UBXN4Q92575 508 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 RSPH14Q9UHP6 348 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 RIMS1Q86UR5 1692 aaKnown RBP12.71□□□□□ -0.37
ATG9A-202ENST00000396761 AKAP12Q02952 1782 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.37
ATG9A-202ENST00000396761 GYS2P54840 703 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 BMS1Q14692 1282 aaKnown RBP12.71□□□□□ -0.37
ATG9A-202ENST00000396761 KRBA2Q6ZNG9 492 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
ATG9A-202ENST00000396761 RAB11FIP3O75154 756 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 URI1O94763 535 aaPredicted RBP12.71□□□□□ -0.38
ATG9A-202ENST00000396761 CAPN2P17655 700 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 ATP8B2P98198 1209 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.38
ATG9A-202ENST00000396761 SNW1Q13573 536 aaKnown RBP12.71□□□□□ -0.38
ATG9A-202ENST00000396761 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 PPP1R42Q7Z4L9 355 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 ZSWIM4Q9H7M6 989 aa12.71□□□□□ -0.38
ATG9A-202ENST00000396761 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.38
ATG9A-202ENST00000396761 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.38
ATG9A-202ENST00000396761 RAD50Q92878 1312 aa12.7□□□□□ -0.38
ATG9A-202ENST00000396761 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms