RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 TSC1Q92574 1164 aa12.55□□□□□ -0.4
TUBB-208ENST00000396389 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
TUBB-208ENST00000396389 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
TUBB-208ENST00000396389 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
TUBB-208ENST00000396389 SKOR2Q2VWA4 1001 aaPredicted RBP12.55□□□□□ -0.4
TUBB-208ENST00000396389 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
TUBB-208ENST00000396389 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
TUBB-208ENST00000396389 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
TUBB-208ENST00000396389 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
TUBB-208ENST00000396389 SMARCC1Q92922 1105 aaPredicted RBP12.55□□□□□ -0.4
TUBB-208ENST00000396389 SNX21Q969T3 373 aa12.55□□□□□ -0.4
TUBB-208ENST00000396389 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
TUBB-208ENST00000396389 CDK11BP21127 795 aaKnown RBP12.54□□□□□ -0.4
TUBB-208ENST00000396389 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
TUBB-208ENST00000396389 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
TUBB-208ENST00000396389 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
TUBB-208ENST00000396389 KCPQ6ZWJ8 1503 aa12.54□□□□□ -0.4
TUBB-208ENST00000396389 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
TUBB-208ENST00000396389 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
TUBB-208ENST00000396389 MYD88Q99836 296 aa12.54□□□□□ -0.4
TUBB-208ENST00000396389 MRC1P22897 1456 aa12.54□□□□□ -0.4
TUBB-208ENST00000396389 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 K7ELQ4 463 aaPredicted RBP12.53□□□□□ -0.4
TUBB-208ENST00000396389 HLFQ16534 295 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 ITGB4P16144 1822 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TUBB-208ENST00000396389 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 AK7Q96M32 723 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
TUBB-208ENST00000396389 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 TFCP2L1Q9NZI6 479 aa12.53□□□□□ -0.4
TUBB-208ENST00000396389 CT47B1P0C2W7 299 aaPredicted RBP12.52□□□□□ -0.4
TUBB-208ENST00000396389 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.4
TUBB-208ENST00000396389 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.4
TUBB-208ENST00000396389 RNF214Q8ND24 703 aa12.52□□□□□ -0.41
TUBB-208ENST00000396389 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
TUBB-208ENST00000396389 HYPKQ9NX55 129 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
TUBB-208ENST00000396389 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 MEIS3Q99687 375 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
TUBB-208ENST00000396389 NUCB1Q02818 461 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 ZNF827Q17R98 1081 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
TUBB-208ENST00000396389 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
TUBB-208ENST00000396389 DNAAF4Q8WXU2 420 aa12.5□□□□□ -0.41
TUBB-208ENST00000396389 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
TUBB-208ENST00000396389 DDX19BQ9UMR2 479 aa12.5□□□□□ -0.41
TUBB-208ENST00000396389 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
TUBB-208ENST00000396389 APBB1O00213 710 aa12.5□□□□□ -0.41
TUBB-208ENST00000396389 HOXB7P09629 217 aa12.5□□□□□ -0.41
TUBB-208ENST00000396389 LRP10Q7Z4F1 713 aa12.5□□□□□ -0.41
TUBB-208ENST00000396389 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
TUBB-208ENST00000396389 C5P01031 1676 aa12.49□□□□□ -0.41
TUBB-208ENST00000396389 KDM3BQ7LBC6 1761 aa12.49□□□□□ -0.41
TUBB-208ENST00000396389 ADCY9O60503 1353 aa12.49□□□□□ -0.41
TUBB-208ENST00000396389 PLEKHG2Q9H7P9 1386 aa12.49□□□□□ -0.41
TUBB-208ENST00000396389 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
TUBB-208ENST00000396389 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
TUBB-208ENST00000396389 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
TUBB-208ENST00000396389 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
TUBB-208ENST00000396389 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
TUBB-208ENST00000396389 NBPF7P0C2Y1 421 aaPredicted RBP12.48□□□□□ -0.41
TUBB-208ENST00000396389 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
TUBB-208ENST00000396389 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
TUBB-208ENST00000396389 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
TUBB-208ENST00000396389 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
TUBB-208ENST00000396389 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
TUBB-208ENST00000396389 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
TUBB-208ENST00000396389 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
TUBB-208ENST00000396389 WWC3Q9ULE0 1092 aa12.48□□□□□ -0.41
TUBB-208ENST00000396389 BTAF1O14981 1849 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 SYCE3A1L190 88 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
TUBB-208ENST00000396389 NPHP1O15259 732 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 RFC4P35249 363 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 FOXD4L6Q3SYB3 417 aaPredicted RBP12.47□□□□□ -0.41
TUBB-208ENST00000396389 FOXD4L3Q6VB84 417 aaPredicted RBP12.47□□□□□ -0.41
TUBB-208ENST00000396389 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 C9orf78Q9NZ63 289 aaPredicted RBP12.47□□□□□ -0.41
TUBB-208ENST00000396389 IGKV5-2P06315 115 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 BAG6P46379 1132 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 ZNF830Q96NB3 372 aaPredicted RBP12.47□□□□□ -0.41
TUBB-208ENST00000396389 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
TUBB-208ENST00000396389 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
TUBB-208ENST00000396389 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
TUBB-208ENST00000396389 PTPRCP08575 1304 aa12.46□□□□□ -0.41
TUBB-208ENST00000396389 HSP90B1P14625 803 aaKnown RBP12.46□□□□□ -0.42
TUBB-208ENST00000396389 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.42
TUBB-208ENST00000396389 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.42
TUBB-208ENST00000396389 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.42
TUBB-208ENST00000396389 ZPR1O75312 459 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms