RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 CCDC87Q9NVE4 849 aa17.82■□□□□ 0.44
RTFDC1-203ENST00000395881 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
RTFDC1-203ENST00000395881 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
RTFDC1-203ENST00000395881 RAB11FIP3O75154 756 aa17.81■□□□□ 0.44
RTFDC1-203ENST00000395881 PROSER3Q2NL68 480 aa17.81■□□□□ 0.44
RTFDC1-203ENST00000395881 UTYO14607 1347 aa17.81■□□□□ 0.44
RTFDC1-203ENST00000395881 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
RTFDC1-203ENST00000395881 CDC45O75419 566 aa17.8■□□□□ 0.44
RTFDC1-203ENST00000395881 ADRA2BP18089 450 aa17.8■□□□□ 0.44
RTFDC1-203ENST00000395881 BECN1Q14457 450 aa17.8■□□□□ 0.44
RTFDC1-203ENST00000395881 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
RTFDC1-203ENST00000395881 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 ANXA1P04083 346 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 POLD1P28340 1107 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 TEX13AQ9BXU3 409 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
RTFDC1-203ENST00000395881 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
RTFDC1-203ENST00000395881 GSPT1P15170 499 aaKnown RBP17.78■□□□□ 0.44
RTFDC1-203ENST00000395881 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
RTFDC1-203ENST00000395881 AOX1Q06278 1338 aa17.78■□□□□ 0.44
RTFDC1-203ENST00000395881 SALL3Q9BXA9 1300 aa17.78■□□□□ 0.44
RTFDC1-203ENST00000395881 STARD3NLO95772 234 aa17.77■□□□□ 0.44
RTFDC1-203ENST00000395881 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
RTFDC1-203ENST00000395881 USP16Q9Y5T5 823 aa17.77■□□□□ 0.44
RTFDC1-203ENST00000395881 RFC4P35249 363 aa17.76■□□□□ 0.43
RTFDC1-203ENST00000395881 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
RTFDC1-203ENST00000395881 NEXNQ0ZGT2 675 aa17.76■□□□□ 0.43
RTFDC1-203ENST00000395881 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
RTFDC1-203ENST00000395881 SRP68Q9UHB9 627 aaKnown RBP17.76■□□□□ 0.43
RTFDC1-203ENST00000395881 EXOC6BQ9Y2D4 811 aa17.76■□□□□ 0.43
RTFDC1-203ENST00000395881 GRM8O00222 908 aa17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 GYS1P13807 737 aa17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 C16orf71Q8IYS4 520 aaPredicted RBP17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 SYT17Q9BSW7 474 aa17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 METTL22Q9BUU2 404 aaPredicted RBP17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 C9orf78Q9NZ63 289 aaPredicted RBP17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 COL15A1P39059 1388 aa17.75■□□□□ 0.43
RTFDC1-203ENST00000395881 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 A1BGP04217 495 aa17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 PDE1AP54750 535 aa17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 SRGAP3O43295 1099 aa17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 COPS6Q7L5N1 327 aa17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
RTFDC1-203ENST00000395881 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
RTFDC1-203ENST00000395881 USP42Q9H9J4 1324 aaKnown RBP17.73■□□□□ 0.43
RTFDC1-203ENST00000395881 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
RTFDC1-203ENST00000395881 ANKRD13DQ6ZTN6 518 aa17.73■□□□□ 0.43
RTFDC1-203ENST00000395881 OTUD7AQ8TE49 926 aaPredicted RBP17.73■□□□□ 0.43
RTFDC1-203ENST00000395881 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
RTFDC1-203ENST00000395881 NLGN1Q8N2Q7 840 aa17.72■□□□□ 0.43
RTFDC1-203ENST00000395881 NEURL1BA8MQ27 555 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 IGKV5-2P06315 115 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 MMP10P09238 476 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 MYL6BP14649 208 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 SDSP20132 328 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 MX1P20591 662 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 USPL1Q5W0Q7 1092 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
RTFDC1-203ENST00000395881 APBB1O00213 710 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 KLHL34Q8N239 644 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 IL6STP40189 918 aaPredicted RBP17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 GCKRQ14397 625 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 RHPN1Q8TCX5 695 aa17.7■□□□□ 0.42
RTFDC1-203ENST00000395881 ZPR1O75312 459 aa17.69■□□□□ 0.42
RTFDC1-203ENST00000395881 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
RTFDC1-203ENST00000395881 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
RTFDC1-203ENST00000395881 A0A087WZG4 1122 aa17.68■□□□□ 0.42
RTFDC1-203ENST00000395881 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
RTFDC1-203ENST00000395881 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
RTFDC1-203ENST00000395881 SNX21Q969T3 373 aa17.67■□□□□ 0.42
RTFDC1-203ENST00000395881 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
RTFDC1-203ENST00000395881 TM4SF1P30408 202 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 DDR1Q08345 913 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 KAZALD1Q96I82 304 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 CD2APQ9Y5K6 639 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 REC8O95072 547 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 MYD88Q99836 296 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 TBC1D2Q9BYX2 928 aa17.66■□□□□ 0.42
RTFDC1-203ENST00000395881 SCN7AQ01118 1682 aa17.65■□□□□ 0.42
RTFDC1-203ENST00000395881 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
RTFDC1-203ENST00000395881 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
RTFDC1-203ENST00000395881 SLC4A3P48751 1232 aa17.65■□□□□ 0.42
RTFDC1-203ENST00000395881 EPB41L2O43491 1005 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms