RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
PTPN20-205ENST00000395721 ALDH1B1P30837 517 aa11.43□□□□□ -0.58
PTPN20-205ENST00000395721 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
PTPN20-205ENST00000395721 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
PTPN20-205ENST00000395721 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
PTPN20-205ENST00000395721 ANP32CO43423 234 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 PRELPP51888 382 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 GNAI1P63096 354 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
PTPN20-205ENST00000395721 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
PTPN20-205ENST00000395721 IFT57Q9NWB7 429 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 CHPF2Q9P2E5 772 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
PTPN20-205ENST00000395721 NTSR2O95665 410 aa11.41□□□□□ -0.58
PTPN20-205ENST00000395721 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
PTPN20-205ENST00000395721 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
PTPN20-205ENST00000395721 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
PTPN20-205ENST00000395721 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
PTPN20-205ENST00000395721 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
PTPN20-205ENST00000395721 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
PTPN20-205ENST00000395721 CCDC88AQ3V6T2 1871 aa11.41□□□□□ -0.58
PTPN20-205ENST00000395721 FKBP4Q02790 459 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPN20-205ENST00000395721 DBF4Q9UBU7 674 aaPredicted RBP11.4□□□□□ -0.58
PTPN20-205ENST00000395721 RNF123Q5XPI4 1314 aa11.4□□□□□ -0.58
PTPN20-205ENST00000395721 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
PTPN20-205ENST00000395721 CRY2Q49AN0 593 aa11.4□□□□□ -0.58
PTPN20-205ENST00000395721 C7orf43Q8WVR3 580 aa11.4□□□□□ -0.58
PTPN20-205ENST00000395721 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
PTPN20-205ENST00000395721 FSTL1Q12841 308 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 HYPKQ9NX55 129 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 APLP1P51693 650 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 TMX4Q9H1E5 349 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-205ENST00000395721 ANKRD36CQ5JPF3 1778 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 NLRP10Q86W26 655 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 IL27Q8NEV9 243 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 CHMP4AQ9BY43 222 aa11.39□□□□□ -0.59
PTPN20-205ENST00000395721 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
PTPN20-205ENST00000395721 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-205ENST00000395721 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 UBE2Q2Q8WVN8 375 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 CRAMP1Q96RY5 1269 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-205ENST00000395721 TRMT112Q9UI30 125 aaKnown RBP11.38□□□□□ -0.59
PTPN20-205ENST00000395721 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-205ENST00000395721 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 SH3TC1Q8TE82 1336 aa11.38□□□□□ -0.59
PTPN20-205ENST00000395721 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
PTPN20-205ENST00000395721 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
PTPN20-205ENST00000395721 IARSP41252 1262 aaKnown RBP11.37□□□□□ -0.59
PTPN20-205ENST00000395721 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
PTPN20-205ENST00000395721 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
PTPN20-205ENST00000395721 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
PTPN20-205ENST00000395721 ELL2O00472 640 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-205ENST00000395721 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
PTPN20-205ENST00000395721 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
PTPN20-205ENST00000395721 HCLS1P14317 486 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-205ENST00000395721 UTRNP46939 3433 aa11.36□□□□□ -0.59
PTPN20-205ENST00000395721 WDR90Q96KV7 1748 aa11.36□□□□□ -0.59
PTPN20-205ENST00000395721 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
PTPN20-205ENST00000395721 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
PTPN20-205ENST00000395721 PSMD1Q99460 953 aa11.35□□□□□ -0.59
PTPN20-205ENST00000395721 DDNO94850 711 aaPredicted RBP11.35□□□□□ -0.59
PTPN20-205ENST00000395721 CCDC27Q2M243 656 aa11.35□□□□□ -0.59
PTPN20-205ENST00000395721 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
PTPN20-205ENST00000395721 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
PTPN20-205ENST00000395721 JDP2Q8WYK2 163 aa11.35□□□□□ -0.59
PTPN20-205ENST00000395721 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
PTPN20-205ENST00000395721 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
PTPN20-205ENST00000395721 ISCA1Q9BUE6 129 aa11.34□□□□□ -0.59
PTPN20-205ENST00000395721 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
PTPN20-205ENST00000395721 ABCC4O15439 1325 aa11.34□□□□□ -0.59
PTPN20-205ENST00000395721 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
PTPN20-205ENST00000395721 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
PTPN20-205ENST00000395721 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 EIF6P56537 245 aaKnown RBP11.33□□□□□ -0.6
PTPN20-205ENST00000395721 WWC1Q8IX03 1113 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 TSR2Q969E8 191 aaKnown RBP11.33□□□□□ -0.6
PTPN20-205ENST00000395721 ZNF428Q96B54 188 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 IL16Q14005 1332 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 BBOX1O75936 387 aa11.33□□□□□ -0.6
PTPN20-205ENST00000395721 SNED1Q8TER0 1413 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 POTECB2RU33 542 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
PTPN20-205ENST00000395721 GRAPQ13588 217 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
PTPN20-205ENST00000395721 NIM1KQ8IY84 436 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms